Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq477 104 2e-17 seq306 102 7e-17 >seq477 Length=47751 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || ||||||||||| | ||||||||| | || || |||||| Sbjct 22935 CACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTC 22876 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| ||||| ||||||| |||| ||| || || || || ||||| || || || | Sbjct 22875 CAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTG 22816 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| ||| ||| || | || || || | || ||||| || Sbjct 22815 GATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTT 22756 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | || || || || |||||||| Sbjct 22755 TCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || || || ||||||||||| | ||| || ||| | |||| | ||| || Sbjct 22706 ACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCA 22647 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || || ||||||| | | ||| ||||| || || ||||| || ||||| | | Sbjct 22646 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGA 22587 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || | ||| |||||| | || || || | ||||| || ||| Sbjct 22586 ATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTT 22527 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| || || ||||| ||||| Sbjct 22526 CCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || ||||| | |||||||||||||| | ||| |||||| | || | |||||| Sbjct 22478 ACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCCTCG 22419 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || ||||| ||| |||| || || | || ||||| |||||||| ||||| ||||| | Sbjct 22418 AGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGG 22359 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| | ||| || || | ||||| || | ||||| || || Sbjct 22358 ATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTCTTA 22299 Query 94979 CCAGTAAGAGTTTTCAC 94995 ||||||||||| || || Sbjct 22298 CCAGTAAGAGTCTTGAC 22282 >seq306 Length=72094 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||||||||| | ||| || |||||||| | ||| || ||| | ||| | | Sbjct 24597 CGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCA 24656 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || || |||||| | ||||| |||| || || || || || || || || ||| Sbjct 24657 TCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 24716 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || |||||||| | ||| ||||| | || || || | |||||| Sbjct 24717 TCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTGATG 24776 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || || || || || || |||||||||||| Sbjct 24777 GTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 24812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448225637412000