Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1098 127 3e-25 seq46 104 4e-18 >seq1098 Length=34876 Score = 127 bits (140), Expect = 3e-25 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||| | |||| ||||||||||| ||||||| || || || | ||||| Sbjct 1799 TGATCTACGAAGAAACCCGTGGTGTTTTGAAGACCTTCCTCGAGGGTGTCATTCGTGATG 1740 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||||||||||||||| || || ||||| ||||| ||| | ||| ||||||| | Sbjct 1739 CCGTCACCTATACCGAGCACGCCAAGCGCAAGACCGTCACTTCCCTTGATGTCGTCTACG 1680 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | ||||| | |||||||||| | |||||||| || ||||| | ||| Sbjct 1679 CTTTGAAGAGACAAGGCCGTACCCTCTATGGTTTCGGTGGTTAAACATCT 1630 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| | ||| | | |||| ||||||||||| ||||||||||||||||| Sbjct 1997 GCTAAGCGTCATCGTAAGATTT-TGAGAGACAACATCCAAGGTATCACCAAGCCAGCTAT 1939 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| | |||| Sbjct 1938 CAGACGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 1898 >seq46 Length=25186 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| |||| | | |||| ||||||||||| || || ||||||||||| Sbjct 21017 GCTAAGCGTCATCGCAAGAT-TTTGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 21075 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| || ||||||||||| ||||||||| |||| Sbjct 21076 CAGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTC 21114 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| |||| |||||| |||| | || ||||||| || | Sbjct 21173 TGATCTACGAGGAGACCCGTGGTGTTCTGAAGAGCTTCTTGGAGGGTGTTATCCGCGACG 21232 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || || || |||||||| || | ||||||||||| ||| | || | ||||| | Sbjct 21233 CTGTCACATACACTGAGCACGCCAAGAGAAAGACTGTCACATCCCTCGACGTTGTCTACG 21292 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | || || ||||| |||| | || |||||||| ||||| Sbjct 21293 CACTCAAGCGCCAAGGACGTACTCTCTACGGTTTTGGTGGTTAA 21336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79064502608100