Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1972 241 2e-58 seq32 156 5e-33 >seq1972 Length=10305 Score = 241 bits (266), Expect = 2e-58 Identities = 1310/2067 (63%), Gaps = 53/2067 (3%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| || || || || | | ||||||| |||||||||||| || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || ||| |||||| || | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || ||||| |||||| ||||||||| || || || | || |||||||||| | | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || ||| | ||||||||||| || || |||| ||| || || |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | | || ||||| ||||||||||| || || || | || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| | | | ||||| || || || |||||||| |||||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | || | || || || || || || || | | ||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 62470 | |||||| | ||| ||||| ||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62530 || | |||| | || | || ||||||| ||| | || | ||| ||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 62531 NNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGT 62586 ||| || ||| || ||||| | | ||| || || |||| Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGGTAAGTCTCGT 8037 Query 62587 ATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 |||| || |||||| || | | || | || || ||| ||| || |||| Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 62644 TTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 62702 | ||||| || | | || |||| |||| ||||| || ||||||||| | ||| Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 62703 AG--AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | || ||| || || || | ||||||||||||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 62761 TAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62819 | | |||| | ||||||||| ||||| || || || || || || || || | ||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 62820 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT 62876 || |||| |||| || || || | || || | ||||| | || | ||| || Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 62877 ---ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62933 ||||| | || |||| || |||| |||||| || ||||||| | | Sbjct 7743 TTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCA 7684 Query 62934 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 62993 | || | | ||||| ||||| | || || || || || | || | ||| Sbjct 7683 GAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGG 7624 Query 62994 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 || ||||| ||||| || ||||| || ||||| ||||| || | || || || | ||| Sbjct 7623 TTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGA 7564 Query 63054 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT 63113 | || | ||| | | ||| | | | ||||| || || ||| | | | || Sbjct 7563 GCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACCCTTGCCT 7507 Query 63114 --CTT-TCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63168 ||| || || | ||| | | | |||||||| || || |||||| |||| | Sbjct 7506 GCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAGC 7449 Query 63169 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63228 |||| || |||| ||| |||||||| | ||||||||||| | | || || ||||| | Sbjct 7448 CAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGA 7389 Query 63229 AGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 | |||||||||||||| | || ||| || ||||| | | | | ||| || || || Sbjct 7388 ATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCG 7330 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 || || ||||| || ||| | | || ||| | |||||| ||||| | ||| | Sbjct 7329 TGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACA 7270 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | | ||||| || ||||| || || ||||| | ||||| || ||||| || || Sbjct 7269 GCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAA 7210 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 |||| | ||| |||| ||||||||| || | || |||||||| | ||| || ||| Sbjct 7209 ACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCA 7150 Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527 | |||||||| | ||| ||||| || || || || | || ||||| | || Sbjct 7149 GTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCA 7090 Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63587 || || || || || |||||||| || || || || || |||| | | || || Sbjct 7089 CAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAG 7030 Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647 || || | ||| | ||| || || ||| | || || |||||||| ||| Sbjct 7029 CATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTA 6970 Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63706 || | || | || | | || || || || ||||| || || || || | || Sbjct 6969 AAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCG-TG 6911 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 ||| || || || |||||||| | ||| || || || | || | | ||| | | Sbjct 6910 AATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAG 6851 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63824 || | || ||| || | || || || || ||||| | ||| ||||| ||| Sbjct 6850 ACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA--TCT 6793 Query 63825 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 63884 || || || | || | |||||||||| || | || | | |||| | || | | Sbjct 6792 CGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCGTAAGT 6734 Query 63885 ATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943 | |||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 6733 TTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATC 6674 Query 63944 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 64003 || || | |||| |||| || |||| ||||| || ||||| || || || | Sbjct 6673 GCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGACTGCAATACG 6614 Query 64004 GGCGGCTAGAATGGCATAATCCGGATG 64030 || ||||||||||||||||| ||||| Sbjct 6613 AGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 156 bits (172), Expect = 5e-33 Identities = 357/531 (67%), Gaps = 15/531 (3%) Strand=Plus/Plus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 |||||| || |||||||| ||||| || | || ||||| || || || ||||| | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATA--AAtttttttAAAT 33117 ||| || ||||| |||||||| || || || |||| | || || | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA-- 142286 Query 33118 CCCAATTCAGAAATCAAT---CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCA 33174 ||||| ||||| | | ||| || ||||| || || ||| ||||| | | Sbjct 142287 CCCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG 142343 Query 33175 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGAT 33234 | ||||| || | || | ||||||||| | || | || ||||||||||| Sbjct 142344 GAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCG 142403 Query 33235 ACCGCATCTGTTATAATAGATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTT 33293 || || || || || | | |||| || ||| | || || ||| | ||| Sbjct 142404 ACAGCTTCGGTGATGACGTCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGA 142462 Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 || | | |||||||||||| ||| ||||| || || | || ||||||||||| Sbjct 142463 GAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGA 142522 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 || ||||| |||| ||| || |||||||| || |||||||| ||||||||||| ||||| Sbjct 142523 GAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCC 142582 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG-- 33471 ||| |||||||| || || || ||||| || || | || | | || | || | Sbjct 142583 AGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTT 142642 Query 33472 -CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142643 CTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 || || | ||| || ||||| | ||| || |||| || || ||||| || || Sbjct 142793 TCCTTGATATATGTGTCGATGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATG 142852 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 || || || |||||||| ||||||||||| | || || ||||| || |||| || Sbjct 142853 ATTTGGAAACCGTAGAAGCATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCA 142912 Query 33685 GCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 33744 |||| || || || || ||||| || ||||| || || || | || || || Sbjct 142913 ACCAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATG 142972 Query 33745 AAATATTTTTCGTCTGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCT 33801 || || ||||| | ||| | |||||| || | | ||| || |||| ||| Sbjct 142973 AAGTAACGCTCGTCGTCATTGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCA 143032 Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 | ||||| | ||||| || |||||||||||||| || ||||| | |||||| Sbjct 143033 ATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACATTTGCCAGAT 143085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622856093972000