Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1972 145 7e-30 seq477 100 3e-16 seq32 89.7 5e-13 >seq1972 Length=10305 Score = 145 bits (160), Expect = 7e-30 Identities = 434/657 (66%), Gaps = 27/657 (4%) Strand=Plus/Minus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 ||||||| | ||| ||| ||||||| || ||||||| || | |||||| ||| Sbjct 7513 CTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGC 7454 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354 || || || ||||| | ||||||||||| | ||| | |||| ||||| || | Sbjct 7453 CAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACT---CTCCGTTCTTTTCAACACG 7397 Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414 |||||| || |||||||| |||||| |||| | | |||||||| || | || || Sbjct 7396 CTTCATGAATAGATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTC 7337 Query 148415 GGCACCCA---TATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 ||| | |||||| ||||| | ||| ||||| || || ||||| || || Sbjct 7336 CTTACCGTGGTTTTTGCGC---AGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTC 7280 Query 148472 GATGTATACGGTCATGGCGCCTTTCC---TTTTACCTCCTTGATCGACATGGCGTAGCA- 148527 | ||| || | | || || | | ||||| ||||||||||||| | | ||| Sbjct 7279 AAGGTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATC-TGGCAG 7221 Query 148528 TGCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTT-CCGTTTGTGGATTCA 148586 || | || ||||| || | ||| | ||| ||| | |||| ||||| || | Sbjct 7220 TGTTGTTGAAAACTCGGAGCATAGGAAC-AATACCGTTGGAGTTTCCGTTGGTACCAGCG 7162 Query 148587 ATTTTACTATTGGTGGCGCGAATT---TGAGTGACATTCAGGCCGATGCCGCCTCCGTGT 148643 || | | || || |||||| ||| || || || || || || || | | Sbjct 7161 ATGTATGCACCAGTAGCACGAATTCTGTGAATG---TTAAGACCAATACCACCAGCATTC 7105 Query 148644 TTAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGA 148703 || || |||||||||||| || | || | ||||| || | |||||||||||| | Sbjct 7104 TTCGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTC 7045 Query 148704 ATGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCA-TGCCAGACGAAAATAGAGT 148762 || | | ||| |||| ||||| | ||| | | | | | | || | |||||| || || Sbjct 7044 ATATCGATGAGGAAGCATGATGAAAGTTGTG-CTTGTGGAGTACCTGCCGAAAAGAGTGT 6986 Query 148763 TGGACTAGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTC 148822 ||| |||||| || || ||| |||||| |||| | ||||||||| ||||| Sbjct 6985 TGGGGAAGCGTGTGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTC 6926 Query 148823 GATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879 |||||||||||| ||||| | || |||||||| | ||| ||||| || | ||| Sbjct 6925 GATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTC 6869 >seq477 Length=47751 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| || | |||||| |||| | || || ||| |||||||| | ||||| Sbjct 22294 ACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCGACAATGTCAAGGCC 22353 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 ||||| ||||| ||||| || |||||||||||||| | | |||| | ||| ||| Sbjct 22354 AAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGATTTTTGCCGGTAAA 22413 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 |||||||| |||| | | | || ||| || ||||||||||| |||||||| | || Sbjct 22414 CAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGGAATCTACCCTTCAC 22473 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 | || || |||||| | || || Sbjct 22474 TTAGTTCTCAGACTTCGTGGTGG 22496 >seq32 Length=157973 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| || || || | || || || || || ||||| || | | || || || | ||| Sbjct 142187 GTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCAT 142246 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 || ||||| || || |||| ||| | | |||||||| ||||| | | || || Sbjct 142247 GAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACCCAAAGAAAGGAGGAGACG 142306 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCGA 119823 ||| || || ||||||||||||| |||| | ||| || ||||||||||| | ||| Sbjct 142307 ATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG-GAGTTCATGCCCAAGAGAGCAC 142365 Query 119824 CCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | ||| | ||| ||||| || | |||||| ||||| ||||| Sbjct 142366 AAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTC 142411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478592395624000