Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1972 289 7e-73 seq32 109 1e-18 >seq1972 Length=10305 Score = 289 bits (320), Expect = 7e-73 Identities = 1151/1785 (64%), Gaps = 30/1785 (2%) Strand=Plus/Plus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||| | ||||| | ||| ||| || || | ||| | |||| | ||| || Sbjct 6811 TTTCGGGTTCAAGACCCTCGAGCGATCATATCTCTTACGTCTTGATGGCAAAGTTGCAGA 6870 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 || || || || ||| | ||||||||||| ||||||| || | || | || Sbjct 6871 GCGTCCACAACAGATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATCGAAAG 6930 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACA 363567 || || ||||| ||||| ||| | || | | ||| || || ||||| | |||||| Sbjct 6931 TGCTATCGAAACTTATAA-CTTG-ATGTCCAACAAGTACTTTACACACGCTTCCCCAACA 6988 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | || || |||| | |||| | || || ||||| || | | |||||| Sbjct 6989 CTCTTTTCGGCAGGTACTCCACAAGCACAACTTTCATCATGCTTCCTCATCGATATGAAG 7048 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || || || || ||||||| || || | |||| |||||| | || || |||||| Sbjct 7049 GAGGACAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCGAAGAAT 7108 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGC- 363744 || || || |||||| | || |||| ||||||| || | || ||||| ||| Sbjct 7109 GCTGGTGGTATTGGTCTTAACATTCACAGAATTCGTGCTACTGGTGCA--TACAT-CGCT 7165 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || ||| |||| || || | ||||| ||||| || || || |||| ||||| Sbjct 7166 GGTACCAACGGAAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCC 7225 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 || || ||||| || ||||| |||||| || || |||||| | || || || || Sbjct 7226 AGATATGTCGATCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTCTACCTTGAACCA 7285 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 ||||| ||| |||| ||||||||||| || || |||||| || || || ||| | Sbjct 7286 TGGCATGCGGATGTTTTCGAGTTTCTTGATCTGCGCAAAAACCACGGTAAGGAAGAAGTT 7345 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 |||||||| ||||| |||||||| | ||| || |||| | || |||||||| || || Sbjct 7346 CGTGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGA- 7404 Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 || || | ||| | | | ||||| | || || || || | | ||||| | Sbjct 7405 AAAGAACGGAGAGTGGACTTTGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGTTTA 7464 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || || || | | ||||| ||||||| ||||| || || |||| ||| ||||| Sbjct 7465 TGGCGAGGAGTTCGAGGCTCTCTACGAAAGTTATGAGAAGGCAGGCAAGGGTCGCAAGAC 7524 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 || ||||| ||||| |||| | || | || | || | ||||| |||| ||| Sbjct 7525 TATCAAGGCACAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAA-ACC 7583 Query 364164 CTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 || | ||| | ||||||||| | |||||| ||| |||||| || |||||||||| | Sbjct 7584 CTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACCA 7643 Query 364223 TTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 ||| |||| |||| | || || |||||| | || ||| | || || || ||| ||| Sbjct 7644 TTC-GCAGTTCCAACTTGTGCACAGAGATTGTCGAGTACTCTGCACCGGATGAGGTTGCT 7702 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTT 364335 |||||| | || || || ||| | || | |||| | || || || |||| Sbjct 7703 TGTTGTAACTTGGCTTCCATTGCGTTACCAACTTTTGTCAACATGAATGAGGGAACTTAC 7762 Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATC 364395 || |||| | ||| | || || | || | | | || | ||||| | || Sbjct 7763 GATTTCCAGAAGCTTCACGAGGTTGTTCAAGTTGTTGTTAGAAACTTGAACAAGATCATT 7822 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || || ||||| |||| |||||| || | ||| | ||||| || || || Sbjct 7823 GACATCAACTACTATCCCGTTCCAGAAGCCAGAAAAAGC-AATTTCCGTCACCGACCTAT 7881 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | | ||||||| || || || ||||| | ||| || || | ||||||| || Sbjct 7882 CGCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCCCTTCGTCTTCCATTTGACTC 7941 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || ||| || | | || || || || || || || || |||| Sbjct 7942 CCCAGAAGCCAAGCATCTTAACATTCAAATTTTCGAGACCATCTACCACGCTGCCTTGAC 8001 Query 364575 TGCTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 | || || | ||||| | | || | ||| ||||| | || ||||| Sbjct 8002 CTCATCCGTCGAGGTTGCAAAGGAACTTGGCCCA-TACGAGACTTACCAAGGCTCCCCAG 8060 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 | || |||| || |||| | ||| | ||| ||| || || ||| | ||| | | Sbjct 8061 TCTCCAAGGGTGAACTCCAATATGACATGTGGGGTGTTACACCTACTGACTTGTGGGATT 8120 Query 364694 GGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 ||||| || | ||| | | ||| | || || ||||||||| || || || Sbjct 8121 GGGAT--TCTTTGAAGCAATCCATCAAGCAACACGGAGTTCGCAACTCGCTTCTTGTTGC 8178 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 || ||||| || || |||| | || || || || ||| || || ||||| || | Sbjct 8179 ACCTATGCCAACTGCCAGTACTTCCCAAATTCTTGGCTTCAATGAATGTTTCGAGCCATA 8238 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || || | ||||| || || |||||| | ||||| |||| || || || | Sbjct 8239 CACTTCGAACATCTATTCCCGTCGTGTTCTTGCTGGAGAGTTTCAAGTCGTCAACCCATG 8298 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || ||||||| ||| ||| || || ||| |||| |||||| ||| |||||| Sbjct 8299 GCTCCTCAAGGACCTTGTCGATATGGGTCTCTGGTCCGACAACATGAAAAACCGTATCAT 8358 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 ||| | | ||| ||| | || ||||| || |||||| || | ||| | |||| Sbjct 8359 CGCGGATGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACATCAAGGCCCTTTA 8418 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| ||||| ||||||||||| ||||| || || | ||||| || ||||| ||||| Sbjct 8419 CAAGACCGTTTGGGAAATTTCTCAACGAACAATCGTTCAAATGGCTGCTGATCGTGGTGC 8478 Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111 |||||| ||| || || | ||| | ||||| | || || | |||| | Sbjct 8479 GTTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGAT 8538 Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||| ||||| || || ||||||| || | ||||| || Sbjct 8539 CACATCTATGCACTTTGCTGGTTGGAAATTGGGCTTGAAGACCGG 8583 >seq32 Length=157973 Score = 109 bits (120), Expect = 1e-18 Identities = 350/533 (66%), Gaps = 10/533 (2%) Strand=Plus/Minus Query 22424 TTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATG-AACA-ATGAACGTTC 22481 ||| || |||||||| ||||| || ||||| | || ||||| || | | |||| | | Sbjct 142695 TTCCATGTATTAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATCCAAGACAAGAAC-TCC 142637 Query 22482 A--TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 | || || ||||||| | || || |||| ||||| || || ||||| |||||| | Sbjct 142636 ACCTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGATCC 142577 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 || | | ||||||||||| || || |||| | ||| | ||||| || || || || Sbjct 142576 TTCGCTTCCATCTTTTGGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCAAC 142517 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAAT 22659 || | || ||| ||||| |||||||| |||||||| || || | || | || Sbjct 142516 GAACTCATCTCCCGTGATGAAGGTCTTCACACCGATTTCGCATGCCTCCT-TTTC--TCC 142460 Query 22660 CATATCATTCA-TAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718 ||| ||| || | |||| | || | || | || | || || | || || || Sbjct 142459 CATCTCAAGCACCGCCCATCCA-AGCAAGCCGTCCAAGACGTCATCACCGAAGCTGTCGA 142401 Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGA 22778 |||||| || | |||||| | || |||| | || || || || | Sbjct 142400 GATTGAACAAGAGTTCTTGACCGAGGCTCTTCCTTGTGCTCTCTTGGGCATGAACTCCAA 142341 Query 22779 ATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGC 22838 |||| ||| || | || ||||| |||||||| | |||| | ||| | | Sbjct 142340 CCTCATGAAGCAATACATCGAGTTCGTTGCCGATCGTCTCCTCCTTTCTTTGGGTAACGA 142281 Query 22839 AAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAA 22898 ||| | || || | || ||||| || | ||||| ||| || | | ||||| Sbjct 142280 CAAGTACTACAAATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGAAA 142221 Query 22899 GACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGG 22951 |||||| |||||||| || ||||||||||| |||||||| || |||||||||| Sbjct 142220 GACCAACTTCTTCGAGAAGAGAGTTGGTGATTACCAAAAGGCTGGTGTTATGG 142168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303158219149400