Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq96 140 2e-28 seq477 96.9 2e-15 >seq96 Length=1803 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 888 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 947 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 948 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 982 >seq477 Length=47751 Score = 96.9 bits (106), Expect = 2e-15 Identities = 168/243 (69%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 38076 CAAATCCAATCATT-ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTG 38134 |||| || | ||| |||||| | | ||| | |||||| || | || |||||||| Sbjct 22968 CAAAAACATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTG 22909 Query 38135 AATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCG 38194 ||| || ||||| || | | | || || || || ||||| ||||| || | || Sbjct 22908 AATGTTATAATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCG 22849 Query 38195 TTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGT 38254 |||||| |||| |||| || || || || || || ||| || || | || ||| Sbjct 22848 TTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGT 22789 Query 38255 ATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTG 38314 |||| ||| |||||||||||||| || || || |||||||| || ||||| ||||| Sbjct 22788 ATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTG 22729 Query 38315 CAT 38317 ||| Sbjct 22728 CAT 22726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334899438622700