Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1972 266 4e-66 seq32 127 3e-24 >seq1972 Length=10305 Score = 266 bits (294), Expect = 4e-66 Identities = 1318/2070 (64%), Gaps = 59/2070 (3%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| || || || || | | ||||||| |||||||||||| || || | Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | |||| || ||| |||||| || | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || ||||| |||||| ||||||||| || || || | || |||||||||| | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || ||| | ||||||||||| || || |||| ||| || || |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | | || ||||| ||||||||||| || || || | || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | | ||||| || || || |||||||| |||||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | | || | || | || || || || || || || | | | ||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 62325 | |||||| | ||| ||||| ||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 62326 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 62385 || | |||| | || | || ||||||| ||| | || | ||| ||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 62386 NNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGT 62441 ||| || ||| || ||||| | | ||| || || |||| Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGG----AGCCTTGGTAAGTCTCGT 8037 Query 62442 ATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498 |||| || |||||| || | | || | || || ||| ||| || |||| Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 62499 TTTCGAAGATCTTCTTATTTAGAT-CTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557 | ||||| || | | || |||| |||| ||||| || ||||||||| | ||| Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 62558 AG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | || ||| || || || | ||||||||||||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 62616 TAGAGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62674 | | |||| | ||||||||| ||||| || || || || || || || || | ||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 62675 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT 62731 || |||| |||| || || || | || || | ||||| | || | ||| || Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 62732 ---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 62788 ||||| | || |||| || |||| |||||| || ||||||| | | Sbjct 7743 TTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCA 7684 Query 62789 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 62848 | || | | ||||| ||||| | || || ||||| || | || | ||| Sbjct 7683 GAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGG 7624 Query 62849 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 62908 || ||||| ||||| || ||||| || ||||| ||||| || | || || || | ||| Sbjct 7623 TTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGA 7564 Query 62909 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT 62968 | || | ||| | | ||| | | | ||||| || || ||| | ||| || Sbjct 7563 GCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGAT---AGTCTTGCGACCCTTGCCT 7507 Query 62969 --CTT-TCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTC 63023 ||| || || | ||| | | | |||||||| || || |||||| ||| | Sbjct 7506 GCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAGC 7449 Query 63024 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63083 |||| || |||| ||| |||||||| | ||||||||||| | | || || ||||| | Sbjct 7448 CAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGA 7389 Query 63084 AGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142 | |||||||||||||| | || ||| || ||||| | | | | ||| || || || Sbjct 7388 ATAGATCAGGAATCCACA-AGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCG 7330 Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202 || || ||||| || ||| | | || ||| | |||||| ||||| | ||| | Sbjct 7329 TGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACA 7270 Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262 || | | | ||||| || ||||| || || ||||| | ||||| || ||||| || || Sbjct 7269 GCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAA 7210 Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322 |||| | ||| |||| |||||| ||||| | || ||||| || | ||| || ||| Sbjct 7209 ACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCA 7150 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 | |||||||| | ||| ||||| || || || || | || ||||| | || Sbjct 7149 GTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCA 7090 Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442 || || || ||||| ||||| || || ||||| || ||| |||| | | || || Sbjct 7089 CAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAG 7030 Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502 || || | ||| | ||| || || ||| | || || |||||||| ||| Sbjct 7029 CATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTA 6970 Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63561 || | || | || | | || || || || ||||| || || || || | || Sbjct 6969 AAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCG-TG 6911 Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63621 ||| || || || |||||||| | ||| || || || | || | | ||| | | Sbjct 6910 AATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAG 6851 Query 63622 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63679 || | || ||| || | || || || || ||||| | ||| ||||| ||| Sbjct 6850 ACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA--TCT 6793 Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 63739 || || || | || | |||||||||| || | || | | |||| |||| | ||| Sbjct 6792 CGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACAT---TCGTA 6737 Query 63740 A---TACTTG-AAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAA 63795 | | |||| ||| |||||| | | | |||||| | || || ||| | | |||| Sbjct 6736 AGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAA 6677 Query 63796 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 63855 ||| || || | |||| |||| || |||| |||||| || ||||| || || || Sbjct 6676 ATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGACTGCAAT 6617 Query 63856 TCTAGCGGCTAGAATGGCATAATCCGGATG 63885 | ||| ||||||||||||||||| ||||| Sbjct 6616 ACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 127 bits (140), Expect = 3e-24 Identities = 353/533 (66%), Gaps = 19/533 (4%) Strand=Plus/Plus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 |||||| || |||||||| ||||| || | || ||||| || || || || || | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATA--AAtttttttAAAT 32474 || || ||||| |||||||| |||||||| |||| | || || | || | | | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA-- 142286 Query 32475 CCCAATTCAGAAATCAAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCA 32531 ||||| ||||| | | ||| || || || || || ||| ||||| | | Sbjct 142287 CCCAA---AGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTG 142343 Query 32532 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 32591 | ||||| || | || | ||||||||| | || | || ||||||||||| | Sbjct 142344 GAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCG 142403 Query 32592 ACCGCGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGT 32648 || || || || || | |||| || | || ||| | || || | | | ||| Sbjct 142404 ACAGCTTCGGTGATGACG--TCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGG 142460 Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708 || | | |||||||||||| ||| ||||| || || | || | ||||||| Sbjct 142461 GAGAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTG 142520 Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768 || || ||||| |||| ||| || |||||||| || |||||||| ||||| || || ||| Sbjct 142521 GAGAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGAT 142580 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 32828 ||||| ||||| || || || || || || || || | || | | || | || | Sbjct 142581 CCAGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAG 142640 Query 32829 ---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 |||| || |||||||| |||||| ||||||||||| || | ||| || Sbjct 142641 TTCTTGTCTTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Score = 104 bits (114), Expect = 3e-17 Identities = 225/334 (67%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttC--ATTACTATCTTTAACATATGTATCAA 32940 ||||| ||||| || || ||||| | |||| ||| || | || | |||||| || | Sbjct 142754 GTCTCAATAGCGTTGAAAAGATATGTCTTTTGGGATTGCT--CCTTGATATATGTGTCGA 142811 Query 32941 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGC 33000 | | ||| || |||| || || ||||| || || ||||| || |||||||||| Sbjct 142812 TGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 142871 Query 33001 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33060 |||||||||| | || || ||||| || |||| || | || || || || || | Sbjct 142872 ATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCAACCAAGTTCTCGTTGACAA 142931 Query 33061 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33120 |||| || ||||| || || || | || || || || || ||||| Sbjct 142932 TTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATGAAGTAACGCTCGTCGTCAT 142991 Query 33121 TTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAA 33177 | ||| | |||||| || | | ||| || |||| ||| | ||||| | ||||| | Sbjct 142992 TGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGA 143051 Query 33178 ATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 | |||||||||||||| || ||||| | |||||| Sbjct 143052 AAGATGCCTCTGCCTTCTTGTACATTTGCCAGAT 143085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633539331320000