Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq32 129 7e-25 >seq32 Length=157973 Score = 129 bits (142), Expect = 7e-25 Identities = 201/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || ||||| ||||| | || || || |||| || |||| |||||||| |||||| Sbjct 142799 ATATATGTGTCGATGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATTTGG 142858 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| |||||||| || | ||| || ||||| | |||||||| || | Sbjct 142859 AAACCGTAGAAGCATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCAACCAAG 142918 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| || |||||||||||||| || || || | | || || || | Sbjct 142919 TTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATGAAGTAA 142978 Query 93542 TTCTCATCATCTTTAAG---CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| || || || || || || ||| ||| ||||| ||||| | ||| | ||| Sbjct 142979 CGCTCGTCGTCATTGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCAATCTCT 143038 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || | ||||| || ||||| ||||| || |||||||| | ||| || Sbjct 143039 TCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACATTTGCCAGAT 143085 Score = 100 bits (110), Expect = 3e-16 Identities = 159/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || || ||||| || | |||||| || || || || | || ||| ||| || | Sbjct 142472 GCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAG 142531 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| | | || || || |||||||||||||| || ||||| || ||||| || || Sbjct 142532 ACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAA 142591 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 ||||| || || || || || || || | ||||| ||||| | ||| || || | Sbjct 142592 GATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAA---GGTGGAGTTCTTGTC 142648 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 | |||||| || | |||||| ||||| || ||||||||||| || Sbjct 142649 TTGGATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556779359108000