Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq477 150 2e-31 seq306 109 5e-19 seq102 93.3 4e-14 >seq477 Length=47751 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | || ||||| || |||| || || || || | |||||||| | ||| Sbjct 22282 GTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCGAC 22341 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || ||||||||||| || ||||| ||||||||||| ||| | || Sbjct 22342 AATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGATT 22401 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 |||||||| ||||| | |||||| ||| ||| |||||||||||||||||||||| ||| Sbjct 22402 TTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGGAA 22461 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || |||||| | || | || || ||| Sbjct 22462 TCTACCCTTCACTTAGTTCTCAGACTTCGTGGTGGT 22497 Score = 138 bits (152), Expect = 9e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || || ||||| | || || || | | Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || |||||||||||||||||||| ||||| |||||| Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | || ||| |||||| | ||||| |||||| Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| ||| ||||||| || Sbjct 22678 ATCCAAAAGGAATCAACCTTACATTTGGT 22706 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || || ||||| || || | || | ||||| ||| | | Sbjct 22726 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACATTAGAAGTAGAATCGTCA 22785 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || || || ||||| ||||||||||| |||||||| ||| Sbjct 22786 GATACTATCGATAACGTTAAGGCTAAGATCCAAGATAAGGAGGGTATCCCACCCGACCAA 22845 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || ||||| |||||| | | ||| | || ||||| ||| Sbjct 22846 CAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGATGGCAGAACCCTTTCGGATTATAAC 22905 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 22906 ATTCAAAAGGAATCGAC 22922 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || ||| | |||||||| | ||| | |||| Sbjct 22010 ACCGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGGCC 22069 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| || ||||| || ||||| ||| | || || ||||| || Sbjct 22070 AAGATCCAGGATAAGGAGGGAATCCCACCTGACCAACAGCGTTTGATTTTCGCCGGAAAG 22129 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | |||||| |||||| | ||||||||||| ||||| || ||||| | ||| Sbjct 22130 CAACTTGAGGATGGCCGCACTTTGAGTGATTACAACATCCAAAAGGAGTCCACTCTCCAT 22189 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| | || | || || ||| Sbjct 22190 CTTGTTCTCCGCCTTCGTGGTGGT 22213 >seq306 Length=72094 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || || || | | Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || |||||||||||||| || |||||||| ||| Sbjct 24751 GACACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAA 24692 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| || || | || ||| ||||||| ||||||| |||||| Sbjct 24691 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAAC 24632 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || ||||| | || || || || || | || || ||| Sbjct 24631 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACGTCTCCGTGGTGGT 24584 >seq102 Length=67028 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || || | || ||| | ||| || | || Sbjct 14608 ACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGACACCATCGACAATGTTAAGGCC 14549 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || |||||||||||||| ||||| ||||||||||||||| | || || || || || Sbjct 14548 AAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATCTTCGCTGGAAAG 14489 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | ||||| || || |||| || |||||||| ||||| Sbjct 14488 CAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAA 14445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419668149410500