Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq306 212 1e-49 seq477 190 4e-43 seq102 134 3e-26 >seq306 Length=72094 Score = 212 bits (234), Expect = 1e-49 Identities = 183/227 (81%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || || |||||||| || |||||||| ||||||||||| || |||||| Sbjct 24585 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 24644 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| |||||||| || | || |||||||||||||| Sbjct 24645 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 24704 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| |||||||| ||||| ||||| | || || || Sbjct 24705 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACC 24764 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||||||| |||||||||||||||||||| |||||||| Sbjct 24765 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 190 bits (210), Expect = 4e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || ||||| || | |||||||| | || || || ||||| ||||||| Sbjct 22960 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTAT 22901 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || || || || ||||| || |||||||| || || || || | || |||||||| Sbjct 22900 AATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGT 22841 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 ||||||| || || ||||| ||||| ||||| ||||| ||| ||||| || |||| | Sbjct 22840 CGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACG 22781 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||| || || ||||| ||||| || | |||||||||||| |||||||| Sbjct 22780 ATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| |||| || || || ||||||||||| || ||||| Sbjct 22724 CCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAA 22665 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || || || || || | |||||| || ||||| Sbjct 22664 AGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGG 22605 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||| || ||||| ||||| | ||| || || Sbjct 22604 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACC 22545 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| ||||| ||||||||||| || ||||| Sbjct 22544 TCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 143 bits (158), Expect = 5e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | | || ||||| || || || || ||||| ||||| ||||||||| Sbjct 22496 CCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAG 22437 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | || || ||||| || || | | ||||| ||||| ||| Sbjct 22436 AGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGA 22377 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| |||||||| |||||||| || | || || || Sbjct 22376 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACC 22317 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || || || || || |||||||||| Sbjct 22316 TCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | || || |||||||| ||||||||||| ||||| Sbjct 22212 CCACCACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTC 22153 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | ||||| |||||||| || | | |||||||| ||||| Sbjct 22152 AAAGTGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGG 22093 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| ||||||||| |||||||| || | ||||| || Sbjct 22092 ATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACC 22033 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| ||||| |||| Sbjct 22032 TCAAGGGTGATGGTCTTTCCGGTGA 22008 >seq102 Length=67028 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||||||||| || || ||||| || | || || || | ||||| || ||||| || Sbjct 14445 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 14504 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | |||||| ||||| ||||| || ||||||||||| ||||| ||||| || ||| Sbjct 14505 AAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCG 14564 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | |||||||| || ||||| |||||||||||||| Sbjct 14565 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921487612724000