Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq32 219 8e-52 seq1972 147 4e-30 >seq32 Length=157973 Score = 219 bits (242), Expect = 8e-52 Identities = 365/516 (71%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || || || ||||||||||| |||||||| |||| |||||| | || | || | | || Sbjct 142693 CCATGTATTAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATCCA-AGACAAGAACTCCAC 142635 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || || ||||| ||||||||||| || |||| Sbjct 142634 CTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGATCCTT 142575 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| |||||||| ||||||||| || ||| || ||| |||| ||||||||||| |||| Sbjct 142574 CGCTTCCATCTTTTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGTCTCACCTTCTCCAACG 142516 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | || || || || || | || || || |||||||| ||||| || Sbjct 142515 AACTCATCTCCCGTGATGAAGGTCTTCACACCGATTTCGCATGCCTCCTTTTCTC---CC 142459 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || ||| | |||| | | ||||||| || || || |||| Sbjct 142458 ATCTCAAGCACCGCCCATCCAAGCAAGCCGTCCAAGACGTCATCACCGAAGCTGTCGAGA 142399 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989 | || | |||||| | || || | || || ||| | || | ||||||||| | || Sbjct 142398 TTGAACAAGAGTTCTTGACCGAGGCTCTTCCTTGTG-CTCTCTTGGGCATGAACTCCAAC 142340 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 |||||| |||| |||||| ||| ||| ||||| | |||||| ||||| | Sbjct 142339 CTCATGAAGCAA-TACATCGAGTTCGTTGCCGATCGTCTCCTCCTTTCTTTGGGTAACGA 142281 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | |||||| | | ||| |||||||| |||||||| ||||| |||| || || Sbjct 142280 CAAGTACTACAAATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGAAA 142221 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||| ||||||||| | || | || ||||| Sbjct 142220 GACCAACTTCTTCGAGAAGAGAGTTGGTGATTACCA 142185 >seq1972 Length=10305 Score = 147 bits (162), Expect = 4e-30 Identities = 473/724 (65%), Gaps = 14/724 (2%) Strand=Plus/Minus Query 244723 GTACTGGACAATCTCGGTGCAGAGGTT---ACTGCACTTGATGGTGCCCAGGTGCTGGTG 244779 ||||| ||||||||| ||||| | ||| ||||| ||||| || |||| || || Sbjct 7681 GTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGA---ATGGTACCAAGGTTCTTTTG 7625 Query 244780 ATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTG 244839 ||| ||| |||||| || || ||||| |||||||| || ||||||||| || Sbjct 7624 GTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTG 7565 Query 244840 GGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTC 244899 || | || | || ||| || | ||||||| ||| ||||| ||||||| | Sbjct 7564 AGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTGCGACCCTTGCCTGC 7505 Query 244900 TGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGG 244959 ||| || | ||| || ||||||||||| ||| | || || | | ||| || Sbjct 7504 CTTCTCATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAGCCAGG 7445 Query 244960 GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019 |||| ||||||||| | | ||||||| ||| | | || | || |||||| || Sbjct 7444 GCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAG 7385 Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTT 245079 || || ||||| | ||| | |||||| || | | | || ||| || ||| Sbjct 7384 ATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCGTGGTT 7325 Query 245080 CTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAG 245139 || | ||| || | ||| || || || || | ||||| || || | ||||||||| | Sbjct 7324 TTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAA 7265 Query 245140 GGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATG 245197 || || || |||||||| || || || || | ||| ||| | || | |||||| | Sbjct 7264 AGCACCAGGGCGCTTGTTACCACCTTGATCGA-CAT-ATCTGGCAGTGTTGTTGAAAACT 7207 Query 245198 CGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTG 245257 || || |||| || || ||||| |||| |||||||| || |||||| || || | Sbjct 7206 CGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTA 7147 Query 245258 CCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAG 245317 | | | || ||| | || | || || || | ||| ||||| | ||| || Sbjct 7146 GCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAA 7087 Query 245318 CTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAG 245377 |||| | || || || || || || |||||| |||||| | || || ||||| Sbjct 7086 ATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCAT 7027 Query 245378 GAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTG--GGGCTGGCGTGGGTAA 245435 || || || | | ||||| || | || | ||| |||||| ||| ||||| |||| Sbjct 7026 GATGAAAG-TTGTGCTTGTGG-AGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAA 6969 Query 245436 AGTA 245439 |||| Sbjct 6968 AGTA 6965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944201090392000