Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq306 131 4e-25 seq477 125 2e-23 seq102 109 1e-18 >seq306 Length=72094 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | || | |||| ||| || |||||||| || ||||||| | Sbjct 24585 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 24644 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| |||||||||| |||||||| |||| Sbjct 24645 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 24704 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || || ||||| || || || || || || || | || || || || Sbjct 24705 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACC 24764 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || || || || ||||||||||| |||||||| Sbjct 24765 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | || ||| |||||||| || ||||||| Sbjct 22724 CCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAA 22665 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || || ||||| ||||| |||||| | |||| Sbjct 22664 AGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGG 22605 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || || || || ||||| || || |||| || || || || Sbjct 22604 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACC 22545 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || || |||||||||||||| || ||||| Sbjct 22544 TCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || ||||| || | || || | || || || || || ||||| || || Sbjct 22917 TTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAA 22858 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| || ||||| |||||| || || ||||| ||||| || || || ||||| Sbjct 22857 GATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTAACGTT 22798 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| |||||||||||| | || || ||||| ||||||| |||||||| Sbjct 22797 ATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGAC 22738 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 22737 GAAAATCTGCAT 22726 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || | |||| || ||| ||||| || || || |||| | Sbjct 22496 CCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAG 22437 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | |||||| || || || |||| |||||||||| || Sbjct 22436 AGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGA 22377 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || || || || || | |||| || || || Sbjct 22376 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACC 22317 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| || || ||||||||||||| Sbjct 22316 TCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | ||| || |||||||| || || || Sbjct 22212 CCACCACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTC 22153 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | ||| ||||| ||||| |||| ||||||||| | |||| Sbjct 22152 AAAGTGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGG 22093 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || ||||||||||| || || || ||||| || || | |||| ||||| || Sbjct 22092 ATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACC 22033 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| Sbjct 22032 TCAAGGGTGATGGTCTTTCCGGT 22010 >seq102 Length=67028 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 |||||||| || ||||| | ||| || |||||||| || | ||| ||||| ||||||||| Sbjct 14445 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 14504 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 | ||| |||||| || ||| ||||| || || || ||||| || || || || || Sbjct 14505 AAACGTTGTTGA---TCGGGGGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTG 14561 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || ||||| ||||| || || || ||||||||| Sbjct 14562 TCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACG 14621 Query 288463 AA 288464 || Sbjct 14622 AA 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179477562432600