Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq477 102 8e-17 seq1972 89.7 5e-13 >seq477 Length=47751 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || |||| |||| || ||||| ||||||||||||||||| | Sbjct 22497 ACCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGA 22438 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || | || || || || || |||||| |||| | ||||| || |||||||| Sbjct 22437 GAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGG 22378 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || ||||| || || Sbjct 22377 AATGCCTTCCTTGTCTTGGATCTT 22354 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| ||||||||||| ||||| | | ||| | | || || | |||||| || Sbjct 22922 GTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCA 22863 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || || |||||||| || || || || || ||||| || || ||| Sbjct 22862 GCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTA 22803 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | || ||||||| || | |||||| |||||||| || Sbjct 22802 ACGTTATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTC 22743 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 22742 TTGACGAAAATCTGCAT 22726 >seq1972 Length=10305 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 155222 CAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGA 155281 |||||| ||||| || || | || ||||| || |||| | | ||| || || || Sbjct 7081 CAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGA 7022 Query 155282 TAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTT 155341 | ||| | ||| || || |||| ||| | ||| || |||||||||||| || Sbjct 7021 AAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAAGTACTT 6962 Query 155342 GTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGAT 155401 ||||| | ||||| ||||||||||| || || |||||| |||||| ||||| | Sbjct 6961 GTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCAAC 6902 Query 155402 CGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAAC 155440 || || ||||| | ||| ||||| ||||| ||||| Sbjct 6901 GGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAAC 6863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499571726948000