Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq477 118 1e-21 seq1972 104 2e-17 seq306 91.5 1e-13 >seq477 Length=47751 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 |||||| || | | | || ||||||||||||||||| ||| | ||||| ||||| Sbjct 22479 AACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCCTC 22420 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||||||||||| | | || | ||||||||| || ||||| || ||||| ||||| Sbjct 22419 GAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCTTG 22360 Query 138525 GATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 ||| || || | |||| || | ||| |||| ||||| ||||||| || | || | Sbjct 22359 GATCTTGGCCTTGACATTG-TCGATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTCT 22301 Query 138584 TACCAGTCAGAGTTTTTAC 138602 ||||||| ||||| || || Sbjct 22300 TACCAGTAAGAGTCTTGAC 22282 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||||| | |||| |||||||| |||||||||||| Sbjct 22724 CCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAA 22665 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || ||||| ||||| | | |||| ||||| ||||| || || || Sbjct 22664 AGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGG 22605 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || |||| || | ||||| | ||||| | Sbjct 22604 ATACCCTCCTTGTC-TTGAATCTTGGCCTTCACATTG-TCGATAGTGTCCGATGACTCAA 22547 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| ||||| || || || || ||||| Sbjct 22546 CCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 >seq1972 Length=10305 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 154314 GTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGGCTCATCATGCG 154372 || || ||||||||||| || || ||||| ||||| | || |||| ||||| | Sbjct 7005 GTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAAGTACTTGTTGG-ACATCAAGTT 6947 Query 154373 GTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAG 154432 || |||||||| || |||||| ||||| |||||||| || | || || ||||||| Sbjct 6946 ATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCAACGGCAACACGCATGAT 6887 Query 154433 CATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAG 154492 ||| || || ||||| || || ||| | |||| ||||||||| ||||| Sbjct 6886 CATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAGACGTAAGAGATATGATCGCTCGAG 6827 Query 154493 GGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGC 154543 ||| ||| | |||||||| | ||| | |||||| | |||| ||||||| Sbjct 6826 GGTCTTGAACCCGAAATATTGGTAGTTGAAATCTCGGTCATAGACGATGGC 6776 >seq306 Length=72094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || || || || | | ||||||||||| |||||||||||| Sbjct 24585 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 24644 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || |||||||| || |||| |||| | ||||||||||| || || Sbjct 24645 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 24704 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | ||||| | ||||| || Sbjct 24705 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTG-TCGATTGTGTCCGAAGACTCAAC 24763 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| || | ||||| || || || || || || || ||||||||| || Sbjct 24764 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 24815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189821624000