Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq306 98.7 9e-16 seq477 96.9 3e-15 >seq306 Length=72094 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | ||||| | || || || || ||||||||||| || || ||| | Sbjct 24585 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 24644 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | ||| ||||| ||| | |||||||| || ||||| || || Sbjct 24645 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 24704 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || ||||| || || |||| || | ||||| |||||||| || Sbjct 24705 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACC 24764 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | |||||||| || || || || || || || ||||| Sbjct 24765 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | |||| || || || ||||||||||| || || |||||| Sbjct 22499 ATACCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCG 22440 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | |||||| || || | ||||| || || || || || Sbjct 22439 GAGAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGA 22380 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || ||||| || || |||| || | ||| |||||||||||| Sbjct 22379 GGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCG 22320 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || ||||| || | || || || || ||||| || || Sbjct 22319 ACCTCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGAC 22282 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165 |||||| || || || || | | ||| | |||| || ||||||||||| || |||| Sbjct 22960 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTAT 22901 Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225 |||| | |||| | ||| ||||| || ||||| || | ||||||||||| |||| Sbjct 22900 AATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGT 22841 Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284 | || || || || || |||||||| | | || | | | || | || | || || || Sbjct 22840 CGGGTGGGATACCCTCCTTATCTTGGA-TCTTAGCCTTAACGTTATCGATAGTATCTGAC 22782 Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | |||| || || ||||| | || || || ||||| ||||| Sbjct 22781 GATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451937094532000