Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1972 161 1e-34 seq32 129 7e-25 >seq1972 Length=10305 Score = 161 bits (178), Expect = 1e-34 Identities = 1104/1749 (63%), Gaps = 65/1749 (4%) Strand=Plus/Minus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| ||||| || | ||||| || | | |||| Sbjct 8592 TAGTACATTCCGGTCTTCAAGCCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTG 8533 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 8532 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAACGCACCA 8473 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741 ||||| || ||||| | || | | ||| | || ||||||| || || |||| | Sbjct 8472 CGATCAGCAGCCATTTGAACGA--TTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAA 8415 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801 || ||| || ||| |||| || | ||| ||||| ||||| ||||| || || | Sbjct 8414 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCCGCGATGA 8355 Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861 | | | ||||| | | ||||||||||| || | || |||| | ||| Sbjct 8354 TACGGTTTTTCATGTTGTCGGACCAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATG 8295 Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATG 115921 ||||| || |||||| || || || || | ||||||||| | ||||||| Sbjct 8294 GGTTGACGACTTGAAACTCTCCAGCAAGAACACGACGGGAATAGATGTTCGAAGTGTATG 8235 Query 115922 GCTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCC 115980 |||| || || |||||| | ||||| ||||||| || ||| || ||||| ||||| Sbjct 8234 GCTCGAAACATTCATTG-AAGCCAAGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCA 8176 Query 115981 ATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT-- 116038 | ||||| |||||| | || | | ||| || ||| | | ||||| | Sbjct 8175 ACAAGAAGCGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCC 8116 Query 116039 CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTG 116098 | | | || | || | | | ||||||| ||| | ||||| ||| | ||| ||| Sbjct 8115 CACAAGTCAG-TAGGTGTAACAC-CCCACATGTCATATTGGAGTTCACCCTTGGAGACTG 8058 Query 116099 GCGATCCCTCAAATGTCTCATATGGGC------CCT---CAACCTCCGCCAATTCGGAGC 116149 | || || | | ||||| ||||||| ||| ||||||| | || ||| Sbjct 8057 GGGAGCCTTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCAACCTCGACGGAT---GAGG 8001 Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209 || | ||| ||||| || || ||||| ||||| || || | |||||| | Sbjct 8000 TC------AAGGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGATGCTTGGCTT 7947 Query 116210 CGTCGGAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 | ||| ||||| | ||||| | | || || |||| || |||||||| ||||| Sbjct 7946 CTGGGGAGTCAAATGGAAGACGAAGGGCCAA--GAAAGCATCAGCAAGACCTTGAACACC 7889 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAAT 116326 | | || || || || | | ||| |||| || ||| |||||||| | | Sbjct 7888 AACAGCGATAGGTCGGTGACGGAAATTGCTTTTTCTGGC-TTCTGGAACGGGATAGTAGT 7830 Query 116327 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 116386 | | || || | | | || | ||| | ||||| | | || |||||||| | Sbjct 7829 TGATGTCAATGATCTTGTTCAAGTTTCTAACAACAACTTGAACAACCTCGTGAAGCTTCT 7770 Query 116387 CGTAATCAAAACTGCGAGTCTC-TTCA--TTGACATACTTAGGAAGGGCGATTGACGCCA 116443 | |||| || | | ||| |||| |||||| | | || | || || || |||| Sbjct 7769 GGAAATCGTAAGTTC---CCTCATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGCCA 7713 Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503 ||||| || ||||||| ||| |||||| | ||| || || ||||| || | Sbjct 7712 AGTTACAACAAGCAACCTCATCCGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTTGG 7653 Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563 |||| |||||| || | ||||||||| || ||| |||| || ||||| ||||| | Sbjct 7652 AACTGCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAA 7593 Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCG 116622 |||| | || | || ||||| ||||| | || ||||||| | ||| | | | | | Sbjct 7592 GCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTG 7533 Query 116623 GCTGGCACAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCC 116676 || | | ||| ||| || |||| ||| ||| || || |||||| ||| Sbjct 7532 CCTTG-ATAGT---CTTG---CGACCCTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCC 7480 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || ||||| || || | | |||| | || || || || || || | | || | Sbjct 7479 TCGAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTC 7420 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 || | || || ||||| ||||||||||| || || || ||||| | || ||||| Sbjct 7419 CACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAAG 7360 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 ||||| || ||| ||||||| | || || || |||| || | ||| || | Sbjct 7359 AGATCGCGTGCACGAACTTCTTCCTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAA 7300 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCC 116913 | |||||| ||||| ||||| ||||| || || | | || ||| |||| | Sbjct 7299 ACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCT 7240 Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973 || | ||||| || || || ||| || || || ||||| |||| ||||| | || Sbjct 7239 TGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAG 7180 Query 116974 TGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATC-GTGGATGTGCATA 117030 | || || || || ||| || | || | | || | || || ||| |||| | | Sbjct 7179 TTTCCGTTGGTACCAGCGATGTATG-CACCAG-TAGCAC-GAATTCTGTGAATGTTAAGA 7123 Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 |||||||| || || ||| ||||| || || | | | | | ||||||| ||| Sbjct 7122 CCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCA 7063 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 || || ||| |||| | ||||||||||||| || | ||||| ||| ||| Sbjct 7062 TCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTA 7003 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTA 117209 || || ||||| ||||| | ||||| | || ||| | | ||||||| | || Sbjct 7002 CCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGT-AAAGTACTTGTTGGACATCAAGTTATA 6944 Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269 || || | || ||||| || ||||||||||| | | || ||||| | ||| Sbjct 6943 AGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCAACGGCAACACGCATGATCAT 6884 Query 117270 GTATTGGGG 117278 | ||| || Sbjct 6883 CTGTTGTGG 6875 >seq32 Length=157973 Score = 129 bits (142), Expect = 7e-25 Identities = 339/513 (66%), Gaps = 6/513 (1%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || | ||||||||||||||| ||||| ||| | | | |||||||||||| Sbjct 142187 GTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCAT 142246 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || |||||||| || || | | |||| | |||| || ||||||| Sbjct 142247 GAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACCCAAAGAAAG--GAGGAGA 142304 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 ||||| | ||| |||| ||||| | ||| | |||||||| || | ||| | Sbjct 142305 CGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAGCA 142364 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || || || | |||| | | ||||| || |||||||| | || | | Sbjct 142365 CAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATGACGTCT 142424 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTC 127527 || | | | | || | | || | | | ||| || || || || Sbjct 142425 TGGACGGCTTGCTTGGATGGGCGGT-GCTTGAGATGGGAGAAAAGGAGGCATGCGAAATC 142483 Query 127528 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 127587 ||| ||||| || ||||||||||||||||| || |||||| ||||| | |||||| Sbjct 142484 GGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAG 142543 Query 127588 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 ||| |||||||| | ||| || || | | || || |||||||||||||| ||||| || Sbjct 142544 ACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAAC 142603 Query 127648 ACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 127707 | ||||| || | ||||| | ||||||| | | ||| | | |||||| | Sbjct 142604 AGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTTCTTGTCTTGGATCCACTTGAC 142663 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||||| | ||||| |||| |||||||| || Sbjct 142664 AGCCCAGTCGGCCTTCTTCTTAATACATGGAAC 142696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613417474572000