Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq306 132 5e-26 seq477 82.4 9e-11 >seq306 Length=72094 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| ||||||| || | || |||||||||||| ||||||||||| || ||||| | Sbjct 24596 ACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCC 24655 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||| ||||| |||||||| ||||| ||||| ||||||| || | | |||||| Sbjct 24656 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 24715 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||||| | | | ||||| || || || || | ||||| Sbjct 24716 GTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTGAT 24775 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||||| || || || || ||||| ||||| Sbjct 24776 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || | |||||| | || || || ||||| |||||||| Sbjct 22177 CTCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCATCCTCAAGTTGCTTTCCGGCGAA 22118 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | | |||||| ||| |||||| ||||| ||| Sbjct 22117 AATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGA-CGT 22059 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||| ||||| || || | |||||||| || || || Sbjct 22058 TGTCGATGGTATCGGAAGATTCAACCTCAAGGGTGATGGTCTTTCCGGT 22010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565155733884000