Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq306 138 1e-27 seq32 136 4e-27 seq102 111 2e-19 seq477 87.8 2e-12 >seq306 Length=72094 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||||||||||||| |||| || ||| | | Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| |||||||| || |||||||| Sbjct 24751 GACACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAA 24692 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | ||||||||| |||||||||| Sbjct 24691 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAAC 24632 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || |||||| | ||| Sbjct 24631 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACGT 24596 >seq32 Length=157973 Score = 136 bits (150), Expect = 4e-27 Identities = 347/519 (67%), Gaps = 7/519 (1%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || || || || | ||||| || || || || ||||| | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 |||||| || | ||| || || || |||||||| | ||||||| |||| | Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACC 142288 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 || | ||| || | ||||| |||||||||||||||||| |||| | | | || Sbjct 142289 CAAAGAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTT 142348 Query 132771 AAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | |||| ||| |||| || || || ||||| | || ||| || || |||| | Sbjct 142349 CATGCCCAAGAGA-GCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAG 142407 Query 132830 CGTCGGTGACGATTTCCCTAACG-CGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 | ||||||| || || ||| | || | | ||| || || | ||| ||| Sbjct 142408 CTTCGGTGATGACGTCTTGGACGGCTTGCTTGGATGGGCGGT-GCTTGAGATGGGAGAAA 142466 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | | ||| || || ||| || | || || || | ||| |||||||||||| ||| Sbjct 142467 AGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAG 142526 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | |||| |||||| || || || ||||||||||| |||| ||||| || || Sbjct 142527 GTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAG 142586 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTT 133067 ||||||| ||||| || || |||||||| || || || | | || |||| ||||| Sbjct 142587 AAGAAGATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTTCTTG 142646 Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTT 133105 || | |||||| | ||||| |||||||| ||||| Sbjct 142647 TCTTG-GATCCACTTGACAGCCCAGTCGGCCTTCTTCTT 142684 Score = 111 bits (122), Expect = 2e-19 Identities = 190/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| || || |||| ||||| | ||||||||| |||||| || Sbjct 142802 TATGTGTCGATGAGAAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATTTGGAAA 142861 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| | ||||| | || ||||| | ||| | ||| |||| || Sbjct 142862 CCGTAGAAGCATCTAGCCTCTGGGATTTGAACTTCGCCACTGAATCTCTCAACCAAGTTC 142921 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||| || || ||| || ||||| || || || ||||| ||||| | ||| Sbjct 142922 TCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGGACGTGGGAAATGAAGTAACGC 142981 Query 133348 TCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| ||| || | | ||| ||||||| | ||||| || | || | ||| || Sbjct 142982 TCGTCGTCATTGAGTCTCTCATTCCAGTCGTGAAGATCCTTTGATAAATCAATCTCTTCT 143041 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||| || || |||||||| Sbjct 143042 GCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACAT 143076 >seq102 Length=67028 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| |||||||| | || |||||| || | |||| | | Sbjct 14623 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGACACCATC 14564 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | |||| | || |||| ||||| |||||||||||| |||| ||||| || | Sbjct 14563 GACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTG 14504 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || |||| || || ||| |||||||||||||||||| Sbjct 14503 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAAG 14444 Query 38433 G 38433 | Sbjct 14443 G 14443 >seq477 Length=47751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || ||||| | || || ||| | | Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| ||||| || || | || ||| Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || || || || | ||||| || |||||||||| Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || | |||||||| || ||| Sbjct 22678 ATCCAAAAGGAATCAACCTTACATTTGGTCCTTCGT 22713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500099649728000