Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq477 123 1e-22 seq784 107 8e-18 seq102 107 8e-18 seq1098 95.1 5e-14 >seq477 Length=47751 Score = 123 bits (136), Expect = 1e-22 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || || |||||||| ||||| || || || || || || || |||| ||| | Sbjct 22280 TCGTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCG 22339 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | | || || || ||||| |||||||| |||||||| |||||||| ||||| | Sbjct 22340 ACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGA 22399 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 |||| | || |||||||| || ||||| | || | | ||||| || ||| | |||| Sbjct 22400 TTTTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGG 22459 Query 391240 ATGCAACACTTCACTTAGTATTAAGACT 391267 | | || ||||||||||| | ||||| Sbjct 22460 AATCTACCCTTCACTTAGTTCTCAGACT 22487 Score = 95.1 bits (104), Expect = 5e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || ||| | || ||||| ||||| Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || || |||||||| ||||| || || || ||||||||| Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || |||||||||||||| | ||| | | || || || Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 391230 ATTGATAAGGATGCAAC 391246 || | ||||| |||| Sbjct 22678 ATCCAAAAGGAATCAAC 22694 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || ||||| | || || ||||| || Sbjct 22726 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACATTAGAAGTAGAATCGTCA 22785 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || |||| || || ||||||||||| || || || || || ||| Sbjct 22786 GATACTATCGATAACGTTAAGGCTAAGATCCAAGATAAGGAGGGTATCCCACCCGACCAA 22845 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || || | || || || | || ||||| ||||| | |||||||||| Sbjct 22846 CAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGATGGCAGAACCCTTTCGGATTATAAC 22905 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | ||| | ||||| || Sbjct 22906 ATTCAAAAGGAATCGACATTGCACTTGGT 22934 >seq784 Length=33356 Score = 107 bits (118), Expect = 8e-18 Identities = 195/285 (68%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||| ||||| || || ||||| ||| | ||||| ||||| || || |||| Sbjct 23458 ATGCCGTTGTTACCGTTCCAGCCTACTTCAACGATTCCCAACGTCAAGCCACCAAGGATG 23399 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || ||||||||||| || ||||| || | | || || || || || || |||| Sbjct 23398 CTGGTCAAATTGCTGGTTTGAACGTTCTCAGAGTCGTCAACGAGCCAACTGCTGCCGCTC 23339 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || || ||| | ||| || | || || || | || || | |||| Sbjct 23338 TTGCTTACGGA-TTGGAGAAGGA--------TGAGGACAAGATCATCGCTGTCTACGATT 23288 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | |||||||| ||| |||| ||||| || || || | || || || ||||| | Sbjct 23287 TGGGTGGAGGTACTTTCGATATCTCTGTCCTCGAGATCCAAAAGGGTGTTTTCGAAGTCA 23228 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 || | ||||| || |||||||| | ||||| |||||| | |||| Sbjct 23227 AGTCTACCAACGGAGATACTCACTTGGGAGGCGAAGATTTCGATA 23183 >seq102 Length=67028 Score = 107 bits (118), Expect = 8e-18 Identities = 126/169 (75%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 |||||| |||| ||||| || || || || || || || || |||||||| || || || Sbjct 14635 TATAAT-AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTC 14577 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 ||||| | ||| || | |||| || || ||||| ||||| |||||||| || || Sbjct 14576 CTCTGACACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGA 14517 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 |||||||||||| || ||| | || || |||||||| || ||| | ||| Sbjct 14516 TCAACAACGTTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACT 14468 >seq1098 Length=34876 Score = 95.1 bits (104), Expect = 5e-14 Identities = 275/420 (65%), Gaps = 9/420 (2%) Strand=Plus/Plus Query 451187 CAAAAAG---GAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCT 451243 ||||||| | ||||| | | ||||| | || |||| | || || || || || Sbjct 28102 CAAAAAGATGGCAAGCCTTCCGTACAAGTTGAATACCAAGGAGCAAAAAAGACCTTCACT 28161 Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||| || |||| | ||| |||| || ||||| ||| || ||| ||| | Sbjct 28162 CCTGAGGAGGTTTCCGCCATGATTCTCGGAAAGATGAAGGAAGTCGCCGAATCTTATCTC 28221 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | ||||| | ||||| |||||||||| || || ||||| || ||| | Sbjct 28222 GGAAAGACTGTTACCCACGCAGTTGTTACTGTTCCAGCCTACTTCAACGACAACCAAAGA 28281 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| ||||| ||||| || ||||| || || |||||||| || ||| | |||||| Sbjct 28282 CAAGCTACTAAGGATGCTGGTATCATTGCCGGCTTGAATGTTCTCCGTATTGTCAATGAA 28341 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 ||||| || || ||| | || || || | ||| ||| | || ||| | Sbjct 28342 CCTACCGCCGCAGCTATTGCTTACGG-TTTGGA----CAAGA-CTGGAGGCGAACGTCAA 28395 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 ||| | || | ||| |||||||||||||| |||| ||| | || || ||||| | Sbjct 28396 ATTATCGTCTACGATCTTGGTGGAGGAACTTTTGATGTTTCCCTTCTCTCCATTGATCAC 28455 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || || || || || | || ||||| ||||| | ||||| |||||| | ||| Sbjct 28456 GGTGTCTTCGAGGTTCTTTCTACTGCCGGTGACACTCACTTGGGAGGAGAAGATTTCGAT 28515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975422227463600