Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1291 210 2e-48 seq870 129 4e-24 seq784 100 2e-15 seq1098 86.0 5e-11 seq222 86.0 5e-11 >seq1291 Length=26091 Score = 210 bits (232), Expect = 2e-48 Identities = 491/733 (67%), Gaps = 12/733 (2%) Strand=Plus/Plus Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 ||||| ||||| || | |||| | | |||||||| || || || || ||||| || Sbjct 2387 TTTTCGTTTGAATTCATTAACAAAGTGGTTAACAAGACGGTTGTCGAAGTCCTCACCACC 2446 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 ||| | ||||| || | || | | || | ||| | || || |||| | |||||| Sbjct 2447 CAAGTGAGTATCACCAGCGGTGGACTTGACCTCGAAGATACCTTCCTCAATGGTCAAAAG 2506 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 || ||||| |||||| ||||| | ||| || || || || || ||| || Sbjct 2507 AGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGTTCACCCTCAAT 2566 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || || | ||| || |||| |||||||| || ||||| || || || | | ||| Sbjct 2567 CTTCTTGTCCAAACCGTAAGCAATGGCAGCAGCGGTAGGTTCGTTGATGATACGGAGAAC 2626 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 |||||||||||||| || || || || |||||||| | ||| |||||| | || || Sbjct 2627 GTTAAGACCAGCAATGAGACCAGCGTCCTTGGTGGCTTGACGTTGAGAATCGGTGAAGTA 2686 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATATAAGCGCTTGCCGTT 518341 || |||||||| | || || | | || ||| | || | ||||| || || Sbjct 2687 AGCTGGAACAGTGACGACAGCGTTGTTGACAGTTCCT--CCGAGGTAAGCCTCAGCAGTC 2744 Query 518342 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA 518401 | | |||| ||| || ||||| || || |||| |||||| | |||||||| ||| Sbjct 2745 TCTCTCATCTTAACCAAGATCATAGAAGAGATTTCTTCTGGTGTGAATTGCTTG--TTCT 2802 Query 518402 TT---TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGC 518458 | |||| | | || || | | ||| || || | ||| || || ||||| Sbjct 2803 CTCCCTTGAACTCA-ACCTCGATAACTGGCTTTCCGGCACGGTCAATGACCTTGAATGGG 2861 Query 518459 CAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTT 518517 ||| |||||||| | |||||| || | ||| || | | |||||| || || || Sbjct 2862 AAGTGCTTCATATCGGCTTGAAC-CTCAGAGTCTGCGAACTTACGACCAATCAAACGCTT 2920 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 ||||| || | ||| ||| |||| || || || |||| | ||||| |||||||| || Sbjct 2921 AGCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGGTTCTTGGCGGCATCTCCGAT 2980 Query 518578 CAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 518637 |||| | || || ||||| || | ||| | || ||||| || || || ||||| || || Sbjct 2981 CAGACGCTCGGTATCTGTGAAAGCAACGAAGGAAGGAGTGGTACGGTTTCCTTGGTCGTT 3040 Query 518638 CGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAA 518697 || |||||||| | | | ||| | | | |||||| ||| | || ||||| || Sbjct 3041 GGCGATAATTTCGATTCTGTCATCACGGAAGATACCTACGCAAGAGTAGGTAGTTCCCAA 3100 Query 518698 ATCAATACCAATA 518710 ||| ||||||||| Sbjct 3101 ATCGATACCAATA 3113 Score = 107 bits (118), Expect = 1e-17 Identities = 246/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||| | ||| |||||||| ||||||||||| || || | | |||||| Sbjct 1518 ATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAACACCACGTGGTGCAGGT 1577 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | |||| | || || || || ||| || || ||| Sbjct 1578 GGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 1637 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | ||| || || ||| ||| || || || | || | || || Sbjct 1638 CCCTCGAAGACTTGAATGAGGACACCAGGTTGGTTGTCAGAGAAGGTAGAGAAGACCTCA 1697 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || |||||||| ||| | |||||||| ||||| || Sbjct 1698 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATTTGTCCACCAGCA 1757 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| ||||| | || | |||||| | |||| || | || | | || Sbjct 1758 GTCTCAATACCGAGAGACAATGGCGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 1817 Query 517572 CA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | ||| | |||| ||||| || ||||| | ||| ||||| ||||||||||| ||| Sbjct 1818 GAGGAAGTGTCACCAGAGAGAATGGCAGCTTGGACAGCGGCACCGTATGCAACAGCCTCA 1877 Query 517631 TCAGGATT 517638 ||||| || Sbjct 1878 TCAGGGTT 1885 >seq870 Length=91401 Score = 129 bits (142), Expect = 4e-24 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| ||||||||| | | ||||||||||||||||| |||||||| | ||||| ||| Sbjct 21491 GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 21550 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||||||||| || |||| |||| ||||||||||||| | |||| Sbjct 21551 ACTGTCATTACTGGTGATCCCAATCTTTCTCTTGATGAGGTTGGTGTTCCTCGCAGTATT 21610 Query 668975 GCTAAAAATCTTAC 668988 || | || |||||| Sbjct 21611 GCAAGAATTCTTAC 21624 >seq784 Length=33356 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| ||||||||||| || || | | ||| | ||| || | ||||||| Sbjct 23329 CCGTAAGCAAGAGCGGCAGCAGTTGGCTCGTTGACGACTCTGAGAACGTTCAAACCAGCA 23388 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| || ||||| || |||||||| | ||| |||||||| || || || ||||| ||| Sbjct 23389 ATTTGACCAGCATCCTTGGTGGCTTGACGTTGGGAATCGTTGAAGTAGGCTGGAACGGTA 23448 Query 518297 ATAACGGCAT 518306 | |||||||| Sbjct 23449 ACAACGGCAT 23458 >seq1098 Length=34876 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||| || |||| ||| || || || |||||||| | ||| | | |||||| Sbjct 28376 TTGTCCAAACCGTAAGCAATAGCTGCGGCGGTAGGTTCATTGACAATACGGAGAACATTC 28317 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | || ||||| | || ||||| ||||| ||||||||||| ||||| || || || Sbjct 28316 AAGCCGGCAATGATACCAGCATCCTTAGTAGCTTGTCTTTGGTTGTCGTTGAAGTAGGCT 28257 Query 518288 GGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAG 518330 |||||||||| ||| || | || || ||||| || | ||||| Sbjct 28256 GGAACAGTAACAACTGCGTGGGTAACAGTCTTT-CCGAGATAAG 28214 >seq222 Length=72752 Score = 86.0 bits (94), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 668854 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACG 668913 ||| ||| |||||||| | ||||| |||||| ||||||||||| ||| | |||| ||| Sbjct 16961 AGGAAAACAAGGTCGTTTCAGAGGTAATTTGTCTGGAAAACGTGTGGATTTCTCTGGACG 16902 Query 668914 TACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTAT 668973 || || ||| | | ||||| ||| ||| | || | ||||||| |||||| | | | Sbjct 16901 AACCGTCATTTCCCCCGATCCGAATCTTGGTATCGACGAAGTTGCCGTTCCTATCTTGGT 16842 Query 668974 TGCTAAAAATCTTAC 668988 || || |||||||| Sbjct 16841 GGCAAAGAATCTTAC 16827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780241807460200