Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1972 187 3e-42 seq32 159 4e-34 >seq1972 Length=10305 Score = 187 bits (206), Expect = 3e-42 Identities = 933/1453 (64%), Gaps = 55/1453 (4%) Strand=Plus/Plus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| || || | || | |||||| |||| ||||| || || || ||| ||| || Sbjct 7166 GGTACCAACGGAAACTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCC 7225 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAG 112016 | ||||| | |||| ||| | |||| || || | || ||||| ||||| Sbjct 7226 AGATATGTCGATCAAGGTGG---TAACAAGCGCCCTGGTGCTTTTGCTGTCTACCTTGAA 7282 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 |||||||| |||||| | | ||||| ||||| |||| ||||| ||| | || || Sbjct 7283 CCATGGCATGCGGATGTTTTCGAGTTTCTTGATCTGCGCAAAAACCACGGTAAGGAAGAA 7342 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 | || ||| ||||||||||||| || | |||||||| ||||| ||||||||| | || Sbjct 7343 GTTCG-TGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGT 7401 Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGC 112195 ||| ||| || | ||| || | | || || | || || || | | |||| Sbjct 7402 TGAAAAGAACGGAGAGTGGACTTTGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGT 7461 Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255 || |||||||| || || |||||| || || || |||| || | | | | || Sbjct 7462 TTATGGCGAGGAGTTCGAGGCTCTCTACGAAAGTTATGA-GAAGGCAGGCAAGGGTC-GC 7519 Query 112256 --GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 ||| | | || | | | | ||| | ||||||| || ||||||||||||| || Sbjct 7520 AAGACTAT-CAAGGCACAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGG 7578 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 | || | |||||||||||||| || || ||| | ||||| || |||||||| | || Sbjct 7579 AAACCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGG 7638 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 | || ||||||||| | || ||||| || | || | | | |||||| Sbjct 7639 TACCATTCGCAGTTCCAACTTGTGCACAGAGATTGTCGAGTACTCTGCACCGGATGAGGT 7698 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-A 112491 ||| |||||| | || || || || | || | | ||| | | || | | | Sbjct 7699 TGCTTGTTGTAACTTGGCTTCCATTGCGTTACCAACTTTTGT-CAACATGAATGAGGGAA 7757 Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 | | |||| | || || ||||| ||| || ||| | |||| | |||| Sbjct 7758 CTTACGATTTCCAGAAGCTTCACGAGGTTGTTCAAGTTGTTGTTAGAAACTTGAACAAGA 7817 Query 112552 TTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 | ||||| | || | || |||||| ||| || | ||| ||| | | ||||| Sbjct 7818 TCATTGACATCAACTACTATCCCGTTCCAGA-AGCCAGAAAAAGCAATTTCCGTCACCGA 7876 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCA 112667 || || | | | ||||| |||||||| || |||| ||| | ||| ||| | || Sbjct 7877 CCTATCGCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCCCTTCGTCTTC---CA 7933 Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727 ||||| ||| ||||| ||| | | || | || || ||||| || || ||||| Sbjct 7934 TTTGACTCCCCAGAAGCCAAGCATCTTAACATTCAAATTTTCGAGACCATCTACCACGCT 7993 Query 112728 GCTCTTGAGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 112785 || ||||| | | || ||| | ||| ||| ||| ||||| || || | | | Sbjct 7994 GC-CTTGA-CCTCATCCGTCGAGGTTGCAAAGGAACTTGGCCCATACGAGACTTACCAAG 8051 Query 112786 GTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA---G 112841 | || |||| || |||||| | || |||| ||| ||||||| || | ||| | Sbjct 8052 GCTCCCCAGTCTC-CAAGGGTGAACTCCAATATGACATGTGGG-GTGTTACACCTACTGA 8109 Query 112842 CTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 112901 ||| | || ||||| || | ||| || ||||||| | | || |||| ||| Sbjct 8110 CTT--GTGGGATTGGGATTCTTTGAAGCAATCCATCAAGCAACACGGAGTTCGCAACTCG 8167 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATG 112960 ||| | | ||||| |||||||| ||| || | |||| |||||| | |||||||| Sbjct 8168 CTTCTTGTTGCACCTATGCCAACTGCCAGTACTTCCCAAATTCTTGGCT-TCAATGAATG 8226 Query 112961 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 113020 || || || ||||| ||||||||||| | | || || ||||||||| | Sbjct 8227 TTTCGAGCCATACACTTCGAACATCTATTCCCGTCGTGTTCTTGCTGGAGAGTTTCAAGT 8286 Query 113021 TGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATG 113078 |||||| ||| ||| | | ||||| || || |||||||||||| | | ||| Sbjct 8287 CGTCAAC--CCATGGCTCCTCAAGGACCTTGTCGATATGGGTCTCTGGTCCGACAACATG 8344 Query 113079 AAGGA---TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGAT 113135 || | | |||| | | | ||||| || |||||||| || | ||||||| | Sbjct 8345 AAAAACCGTATCATCGCG---GATGGTGGATCTATTCAAAACATCCCCAACATTCCAGCT 8401 Query 113136 GAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACA 113193 || || ||| | ||| || |||||||||| || | ||| | || || | | Sbjct 8402 GACATCAAGGCCCTTTACAAGACCGTTTGGGAAATTTCTCAACGAACAA--TCGTTCAAA 8459 Query 113194 TGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAA 113253 |||| || ||||||||| || || |||||| |||| ||||| | |||| | Sbjct 8460 TGGCTGCTGATCGTGGTGCGTTTATCGATCAATCTCAATCAATGAACATTCACATGAAGG 8519 Query 113254 GTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAA 113313 ||| || ||| |||| || | ||||||||| | ||||||| ||| | || | Sbjct 8520 ATCCTACAATGGGCAAGATCACATCTATGCACTTTGCTGGTTGGAAATTGGGCTTGAAGA 8579 Query 113314 CGGGGATGTATTA 113326 | || ||||| || Sbjct 8580 CCGGAATGTACTA 8592 >seq32 Length=157973 Score = 159 bits (176), Expect = 4e-34 Identities = 164/212 (77%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 ||||||||||||| | ||||| || || |||||| | |||||| | | |||| | | Sbjct 142697 AGTTCCATGTATTAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATCCAAGACAAGAACTC 142638 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 |||||||| | || ||| |||| || || |||||||||||||||||||||||| | Sbjct 142637 CA-CCTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGAT 142579 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||||| | || | ||||||||||||||| ||||||||| | |||||| |||||||| Sbjct 142578 CCTTCGCTTCCATCTTTTGGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCA 142519 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| || ||||| ||||| || || || ||| Sbjct 142518 ACGAACTCATCTCCCGTGATGAAGGTCTTCAC 142487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620651616424000