Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1972 163 3e-35 seq32 141 1e-28 seq56 91.5 2e-13 >seq1972 Length=10305 Score = 163 bits (180), Expect = 3e-35 Identities = 1056/1667 (63%), Gaps = 67/1667 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| |||||||| || |||||||||||| ||||| | | ||| Sbjct 8506 GTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACGATTGT 8447 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||||||||| || |||||||| | |||||| ||| | ||||||| Sbjct 8446 TCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGG 8387 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 ||||||||||||||| |||||| || | || | | ||||| | | |||||||| Sbjct 8386 GATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGACCAGAG 8327 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCA 109737 ||| | | || || | | || ||| |||||| || ||| || |||||| Sbjct 8326 ACCCATATCGACAAGGTCCTTGAGGAGCCATG--GGTTGACGACTTGAAACTCTCCAGCA 8269 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 || || ||| |||||||| | ||||| || |||||||| |||||| ||| || Sbjct 8268 AGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCAAGA 8209 Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC 109857 ||||| | ||| || || ||||| || || | ||||| ||| || | || | Sbjct 8208 ATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAACAAGAAGCGAGTTGCGAA----CTCC 8153 Query 109858 GTCTTTACCCGC-TCACGCATTGCGTCCCAATCATAACGACCACTAAATT---TAGTCTC 109913 || || || | | | ||||| | | || || | | | | || | ||| Sbjct 8152 GTGTT-----GCTTGATGGATTGC-TTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGT 8099 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 | || ||||||| || ||| ||| |||||| | | || || || | | || |||| Sbjct 8098 AACACCCCACATGTCATATTGGAGTTCACCCTTGGAGACTGGGGAGCCTTGGTAAGTCTC 8039 Query 109974 GTACGACCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACAT 110030 ||| | || ||| || | || ||||||| | || || || || || || || Sbjct 8038 GTATGGGCCAAGTTCCTTTGCAACCTCGACGGATGAGG--TCAAG-GCAGCGTGGTAGAT 7982 Query 110031 AGTCTCAAAAATATGAGCATTCATGAGGCGAGAC-TCTTCACAGTCGAAGGGAAGACCAC 110089 ||||| ||||| ||| || | || || | | ||| |||| || ||||||| | Sbjct 7981 GGTCTCGAAAATTTGAATGTT-AAGATGCTTGGCTTCTGGGGAGTCAAATGGAAGACGA- 7924 Query 110090 AAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147 | | || ||| |||| || ||||| |||||||| | | | || || || || | Sbjct 7923 AGGGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAA 7865 Query 110148 GTTAGAGCGTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAG 110204 || || | | |||| ||||| || ||||| ||| |||| | || | Sbjct 7864 ATT---GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAA 7808 Query 110205 ATTCTTCGTCACAGTCTTCGTG----ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCG 110260 | ||| | ||| | | || | || || || || | | ||||| | ||| | Sbjct 7807 GT--TTC-TAACA-ACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCT 7752 Query 110261 TCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGT 110320 | | | |||||| | | || | ||||| || || | || || || | ||| | Sbjct 7751 CATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCAT 7692 Query 110321 CTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGT 110380 | | | ||| || | ||| || || |||||||||||||| |||| ||| | || Sbjct 7691 CCGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGT 7632 Query 110381 TCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTT 110440 |||| || || || |||||||||||| || || |||||| | ||| | || || | Sbjct 7631 TCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCT 7572 Query 110441 CCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGC 110498 | || || | || ||||| | | ||| | | || || || ||||| | | Sbjct 7571 CGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTGCG--ACC 7514 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 ||| ||| ||| || | ||| | |||| || |||| || || ||||| | Sbjct 7513 CTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGC 7454 Query 110559 AAGACCCTTCGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCT 110617 | | || || || | || || | | | ||| | ||| || ||||| | || Sbjct 7453 CA-AGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCT 7395 Query 110618 TCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCAT 110677 ||||||| || ||||||||||||| || |||| || || || |||| | ||||| | Sbjct 7394 TCATGAATAGATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCT 7335 Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737 ||| ||||| ||| || || | ||| || | | ||||| ||||||||||| || | Sbjct 7334 TACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGT 7275 Query 110738 AGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGG 110791 ||||||| | | || | | || ||| | || | ||||| | || ||| Sbjct 7274 AGACAGCAAAAGCACC---AGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGT 7218 Query 110792 CATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC-CCTAATT 110850 ||||| || | ||||||||||| ||| || | ||| | || || ||||| | | | Sbjct 7217 TGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGT 7158 Query 110851 CTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTA 110910 || || | | |||||||| ||| || | | |||||||||||| || ||| Sbjct 7157 ATGCAC-CAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAG 7099 Query 110911 ATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGC 110969 || |||| | ||| | | ||| | || ||||||||||| || |||| | | Sbjct 7098 ATCATGGCACAAATCT-TCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATC 7040 Query 110970 AATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGT 111029 || || ||||| || || | || | | || || || || |||||||| || | Sbjct 7039 GATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGA 6980 Query 111030 CGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACA 111087 || || || | || |||| ||||||| ||| || || |||| || | Sbjct 6979 AGCGTG--TGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATG 6922 Query 111088 TCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG 111134 || | |||||||||||||| |||||| ||||||| ||| | ||| || Sbjct 6921 TCATCACCGTGAATACCAACGGCAACACGCATGATCATCTGTTGTGG 6875 >seq32 Length=157973 Score = 141 bits (156), Expect = 1e-28 Identities = 334/495 (67%), Gaps = 11/495 (2%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||||| || ||||| |||||||| || ||||| ||| | | ||||| || ||||| Sbjct 142188 TAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCATG 142247 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || || || || | | || ||| |||| || ||||| Sbjct 142248 AAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACCCAAAGAAAGG-AGGAGACG 142306 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 ||||| || ||||||| |||| ||| | || ||||| || | |||| ||| Sbjct 142307 ATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAGCACA 142366 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || ||||| ||| | ||| | | || ||||| |||||||| | | || | || Sbjct 142367 AGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATGACGTCTTG 142426 Query 119447 AATAGTTTCTGTCGATGGTTTGT--TTCTCAAGAGTTTAAACAACTCTACGGCAAATTCT 119504 | | || | ||||| || || | | | ||| | | | | |||| Sbjct 142427 GACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAGAAAAGGAGGC-ATGCGAAATCGG 142485 Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 || ||||| |||||||| || |||||||| || || |||| || || | |||||| Sbjct 142486 TG-TGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGA 142544 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | ||||| ||||||||||||| | || |||||| |||||||| ||||| ||| Sbjct 142545 CCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACA 142604 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAG 119680 |||||||||| ||||| | ||| |||||| ||| |||||| || |||||||| Sbjct 142605 GCAGCGAAAGCGACGAGACGTTGAGC-AAAGGTGGAGTTCTTGTCTTGGATCCACTTGAC 142663 Query 119681 AGCCCAGTTGGCCTT 119695 |||||||| |||||| Sbjct 142664 AGCCCAGTCGGCCTT 142678 >seq56 Length=107310 Score = 91.5 bits (100), Expect = 2e-13 Identities = 327/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 ||| |||||||| || | | |||||| | ||||| | ||| | || ||| | || Sbjct 71566 ATCAAAACGACCAGGTCTCATTAGAGCCTTGTCAAGTACGTCGGGTCTATTGGTACCAGC 71625 Query 11565 AATGACTACAAT--GC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621 || || ||||| || ||||| ||| |||||||||||| || || | || || || Sbjct 71626 AAGAACAACAATTTGCTCAGTCG---TGTTGAAACCGTCCATCTCAGTCAAAATTTGATT 71682 Query 11622 GATCGTCTGTTCACGCTCATCGTTG---------GAGGGCATACC--ACCTGCCGAACGC 11670 || || ||| || |||||||| || | ||| || | || ||| Sbjct 71683 GAGTGTAGCTTCCCGTTCATCGTTTCCACCTCCAGAAAACCCACCGGACTTTCC--ACGA 71740 Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||| |||| ||| || || ||||| ||||| | ||||| || | | ||| Sbjct 71741 GACTTTCCGATAGCATCGATTTCATCAATGAAGATAATACAAGGAGTACTCTTTCTGGCC 71800 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 ||||||| || || || | | ||||||||||| || |||||||| ||||| | Sbjct 71801 ATAGCGAAAAGATCCCGAACTCTCGATGCTCCAACACCAACAAACATCTCGACGAATTCG 71860 Query 11791 GCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || ||||| || ||| || || | ||| |||||||| | || || | | Sbjct 71861 GAACCACTGACACT-AAAGAATGGTACTTGAGATTCACCAGCTGTTGCCTTTGCCAACAA 71919 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--- 11906 ||| ||||| ||||| |||| |||| |||| || || || ||||| || ||||| Sbjct 71920 AGTTTTACCAGTACCTGGTGGTCCAGAAAGAATAGCACCGCGAGGGATTTTAGCACCTAG 71979 Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTT 11966 || | || | ||||||| |||| |||||| |||| |||| || |||| ||| Sbjct 71980 ACGTTGGAATT---GCTCAGGTGTCTTTAGGAAGGAGACAAACTCCATAATTTCCAGCTT 72036 Query 11967 GGCGGAGTCGATACCCTCAACATC 11990 || || ||||| ||||||| Sbjct 72037 TGCTTCATCCATACCAGCAACATC 72060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588889862260000