Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1972 264 1e-65 seq32 107 2e-18 >seq1972 Length=10305 Score = 264 bits (292), Expect = 1e-65 Identities = 1134/1760 (64%), Gaps = 57/1760 (3%) Strand=Plus/Minus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 ||| ||| || | ||||||||| |||||||| | || |||||| | | ||| Sbjct 8607 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAGCCCAATTTCCAACCAGCAAAGTGC 8548 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700 ||||| | || |||| ||| || ||| | |||| || ||||| |||| || Sbjct 8547 ATAGATGTGATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 8488 Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCC 105758 || || || |||||| | || ||||| | || || | ||| | || |||||| Sbjct 8487 TCGATAAACGCACCACGATCAGCAGCCATTTGAACGA--TTGTTCGTTGAGAAATTTCCC 8430 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818 | || || ||| || |||||| ||| |||| || | | ||| |||||||| || | Sbjct 8429 AAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATC 8370 Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878 | || || || || | | ||||| | | |||||| ||||| || | || | Sbjct 8369 CACCATCCGCGATGATACGGTTTTTCATGTTGTCGGACCAGAGACCCATATCGACAAGGT 8310 Query 105879 CATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATA 105936 | |||| ||| ||| |||||| | ||||||||| || || | | ||| Sbjct 8309 CCTTGAGGAGCCATGG--GTTGACGACTTGAAACTCTCCAGCAAGAACACGACGGGAATA 8252 Query 105937 GATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGG 105995 |||||||| ||||| || || || |||||||| | |||||| |||| | || || Sbjct 8251 GATGTTCGAAGTGTATGGCTCGAAACATTCATTGA-AGCCAAGAATTTGGGAAGTACTGG 8193 Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCT 106055 | |||||||| ||||| | | ||| ||| |||| || | || ||||||| || || Sbjct 8192 CAGTTGGCATAGGTGCAACAAGAAGCGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCT 8133 Query 106056 TGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 | | | |||||| || | | || | ||| | || ||||||| ||| |||| || Sbjct 8132 TCAAAGAATCCCAATCCCACAAGTCAG-TAGGTGTAACAC-CCCACATGTCATATTGGAG 8075 Query 106114 CAC-CCCTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 | ||||||| ||| ||||| || | | ||||| || | || | | | || Sbjct 8074 TTCACCCTTGGAGACTGGGGAG--CCTTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCA 8017 Query 106172 AATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 | || || | | || ||| | ||||| || ||||| || || || || || | Sbjct 8016 ACCTCGACGGATGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAG 7958 Query 106231 CTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCG 106285 | ||||||||| || ||||||| || || | || ||| |||| || Sbjct 7957 ATGCTTGGCTTCTGGGGAGTCAAATGGAAGACGAAGGGCCAAGAAAG-----CATCAGCA 7903 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC- 106344 |||||||||||||| | | | ||||||| ||| || | ||| |||| || ||| Sbjct 7902 AGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAATTGCTTTTTCTGGCT-TCTGG 7844 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 ||||||||| | || ||||||||| ||| | ||| | ||||| | | Sbjct 7843 AACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTTCTAACAACAACTTGAACAAC 7784 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAG 106461 || ||||| || | |||| |||| | ||| ||||| ||||| | |||| | Sbjct 7783 CTCGTGAAGCTTCTGGAAATCGTAAGTTCC---CTCATTCATGTTGACAAAAGTTGGTAA 7727 Query 106462 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 106521 || || || ||||| || ||| ||| ||||||| | | |||||| | ||| || Sbjct 7726 CGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGGTGCAGAGTACTCGACAATCTC 7667 Query 106522 TGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCA 106581 ||| |||||||||||||| ||| || || | ||||||||||| ||||| |||||||| Sbjct 7666 TGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCA 7607 Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641 ||||| ||||| |||||| | || | || ||||| || || | || ||||| | | Sbjct 7606 TGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTA 7547 Query 106642 CCACA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGT 106698 ||| | | | | | | || || | || | ||| | ||| || ||| || || Sbjct 7546 CCAAAGCTTTTGTGCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTCTCATAACTTTC 7490 Query 106699 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 106758 |||||| || || |||||||| || | || | | || || || | || || Sbjct 7489 GTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCATTCGGGCA 7430 Query 106759 GAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818 | | || ||| | || || ||||| ||||||||||| || || |||||||||| Sbjct 7429 CATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAA 7370 Query 106819 GGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 106877 || | |||||||| | | || ||| | ||||| | ||| ||||| || | |||| Sbjct 7369 GGCATAGAAGAGATCGCGTGCA-CGAACTTCTTCCTTACCGTGGTTTTTGCGCAGATCAA 7311 Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CT 106931 | ||||| | | |||||| |||||||| ||||| ||||| || | || || || Sbjct 7310 GAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCAGGGCGCT 7251 Query 106932 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991 | | ||| |||||| ||||| | || ||| ||| || || || ||||| |||| Sbjct 7250 TGTTA---CCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAA 7194 Query 106992 TAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCAT 107051 |||||| | || | || || || || || | | | || | | | Sbjct 7193 CAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGAATTCTGT 7134 Query 107052 GGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTC 107111 | |||| | |||||||| ||||| ||| ||||| ||||| | | | ||| Sbjct 7133 GAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTAT 7074 Query 107112 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCG 107171 | |||||||| | || ||||||||| | |||| |||||||| || | || | Sbjct 7073 CGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTGTG 7014 Query 107172 GTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGAC 107230 | ||| ||||| || ||||| ||||| | ||||| | || ||| | | |||| Sbjct 7013 CTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGT-AAAGTACTTGTTGGAC 6955 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 ||| || || || || | || || ||||| || ||||| || || | ||| ||| Sbjct 6954 ATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCAACGGCAACA 6895 Query 107291 CGCATAAACATGTATTGGGG 107310 ||||| | ||| | ||| || Sbjct 6894 CGCATGATCATCTGTTGTGG 6875 >seq32 Length=157973 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||| ||||| ||||| || ||||| || |||||| || || | ||||||||| Sbjct 142487 GTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGACC 142546 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | |||| | || | ||| || || ||||||||||||||||| ||| Sbjct 142547 ACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACAGC 142606 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || || | || || | || |||| | ||| |||| | | ||| || | | Sbjct 142607 AGCGAAAGCGACGAGACGTTGAGCAAAGGTG-GAGTTCTTGTCTTGGATCCACTTGACAG 142665 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 |||| | |||||||||| ||||||||| || Sbjct 142666 CCCAGTCGGCCTTCTTCTTAATACATGGAAC 142696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589894515308000