Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq306 140 7e-28 seq477 136 9e-27 >seq306 Length=72094 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||||||||||||||| ||||| || ||||| |||| || || | |||||| Sbjct 24600 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 24659 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| ||||| || |||||||| | ||| |||||||| || || || || || |||||| Sbjct 24660 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 24719 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || |||||| || || || ||||||||| || || || ||||| | || Sbjct 24720 TGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 24779 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 24780 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | |||||| || || || |||||||| |||||||||| || || | Sbjct 22487 AGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGG 22428 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||| || ||||| || || || | || ||||| || |||||||||||||| Sbjct 22427 CCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCC 22368 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| || || ||||| || ||| || || || ||||| Sbjct 22367 TTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTG 22308 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | ||||| || || | ||| || |||| Sbjct 22307 ATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || ||||| || ||||| |||| |||||| | |||||||| || |||||||| Sbjct 22694 GTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCA 22635 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || |||||||| |||||||| || || || || || || ||||||||||| || ||| Sbjct 22634 GCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTC 22575 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || |||||||| || || || | || | |||||||| || | ||| Sbjct 22574 ACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTC 22515 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | |||||| Sbjct 22514 TTGACGAAGATTTGCAT 22498 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || || |||||||| || ||||| | ||| ||||| ||||| || | |||||| || Sbjct 22922 GTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCA 22863 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | |||||||||||| || || || || || || ||||| || || ||| Sbjct 22862 GCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTA 22803 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||| || || || || || ||| ||||| | |||| |||||||| ||||| || Sbjct 22802 ACGTTATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTC 22743 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 22742 TTGACGAAAATCTGCAT 22726 Score = 120 bits (132), Expect = 7e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || ||||||||||| ||||| || |||||||| | ||| | ||||| || Sbjct 22195 AACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCATCCTC 22136 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || ||||| || | || |||||||| || || || || || || || || Sbjct 22135 AAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTATCCTG 22076 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| || ||| ||| || |||||||| | ||||| Sbjct 22075 GATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCAAGGGTGATGGTCTT 22016 Query 195111 TCCTGT 195116 ||| || Sbjct 22015 TCCGGT 22010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109315281773900