Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq306 113 3e-20 seq477 91.5 1e-13 >seq306 Length=72094 Score = 113 bits (124), Expect = 3e-20 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| ||| || || || ||||| ||||| || ||| | || |||| Sbjct 24600 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 24659 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || |||||||| || || | ||| || ||||| | || | ||||||||||| Sbjct 24660 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 24719 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTAT 34945 ||||| ||||| || | ||||| | ||| | |||||| |||| ||| || Sbjct 24720 TGGATCTTGGCCTTGAC--AT--TGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTGAT 24775 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| |||||||| ||||| || ||||||||||| Sbjct 24776 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 >seq477 Length=47751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| || ||||||||||| ||||||||| ||| |||| ||| Sbjct 22934 ACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTCC 22875 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| ||||| ||||| || | |||||| ||||| | || | |||||||| || Sbjct 22874 AACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGG 22815 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || | ||||||| || | || || || | || ||||| Sbjct 22814 ATCTTAGCCTTAAC----GTTATCGATAGTATCTGACGATTCTACTTCTAATGTAATGGT 22759 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | ||||| || || ||||||||| Sbjct 22758 CTTTCCGGTCAAGGTCTTGACGAAAATCTGCATA 22725 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| ||||| ||||| | || |||| || || || || || ||||| Sbjct 22689 TTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAA 22630 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| || || | || | ||||||||||| |||||| || || | Sbjct 22629 GATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTCAC--A 22572 Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| | ||| | |||||| || | || || || ||||| |||||||||| Sbjct 22571 T--TGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCT 22514 Query 34966 TCACAAAGATCTGCATA 34982 | || ||||| |||||| Sbjct 22513 TGACGAAGATTTGCATA 22497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324587309277600