Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1972 159 4e-34 >seq1972 Length=10305 Score = 159 bits (176), Expect = 4e-34 Identities = 534/823 (65%), Gaps = 10/823 (1%) Strand=Plus/Minus Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050 ||||| ||||| || ||||||||||| ||||| |||| || || | |||| |||| Sbjct 7614 TTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGA 7555 Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTA- 48109 ||||| | ||||| | ||||| ||| | | | || | | || || Sbjct 7554 ATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTGCGACCCTTGCCTGCCTTCTCATAA 7495 Query 48110 -TTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCAT 48168 ||| ||| | | | ||| || || || ||||| |||| | || ||||| || |||| Sbjct 7494 CTTTCGTAGAGAGC--CTCGAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCAT 7437 Query 48169 TAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTA 48228 | || |||||||| | ||| || | | |||| || | |||| |||| ||| || | Sbjct 7436 TCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAA 7377 Query 48229 TCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA 48287 |||| | || ||| || | ||| | | | | |||||| || || || | Sbjct 7376 TCCACAAGGC-ATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCGTGGTTTTTGCGC 7318 Query 48288 AGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCT 48347 || |||||||| || | | ||| |||||||||||||| | || | || | |||| Sbjct 7317 AGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCA 7258 Query 48348 GGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATT 48407 || || || ||||| |||||||| | |||||||||||| ||||| |||||| | ||| Sbjct 7257 GGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATA 7198 Query 48408 GGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATA 48467 || |||||||| || || | || ||||| || | || || ||| |||| | || Sbjct 7197 GGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGAATT 7138 Query 48468 TTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGG 48527 | ||| || ||| |||||||| || | || || || | ||||| || | Sbjct 7137 CTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAA 7078 Query 48528 GTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATT 48587 ||||| || || || || ||||| || || |||||| | || || || || | | Sbjct 7077 GTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGT 7018 Query 48588 TGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCT 48647 || | || ||| |||| ||| | |||||| || || || |||| | || | Sbjct 7017 TGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAAGTACTTGTTG 6958 Query 48648 GATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGA 48706 || | ||| ||||| ||||| ||| || || || || || | || ||||| | | Sbjct 6957 GACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCG-TGAATACCAACGGC 6899 Query 48707 TACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATA 48766 |||||||| | ||| | ||| || | || ||| |||| || | || ||||| Sbjct 6898 AACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAGACGTAAGAGATA 6839 Query 48767 TGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 |||| || | || || || || ||||| | ||| ||||| Sbjct 6838 TGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA 6796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562026591588000