Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq477 93.3 3e-14 seq306 82.4 6e-11 >seq477 Length=47751 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || |||||||| || ||||| || || ||| | || ||||||||||| || ||||| Sbjct 22916 TCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAG 22857 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| ||||| || | || | |||||||| || ||||| || || | Sbjct 22856 ATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTA 22797 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || ||||||| || || || | ||||| || ||||| ||||| || || || Sbjct 22796 TCGATAGTATCTGACGATTCTACTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACG 22737 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 22736 AAAATCTGCAT 22726 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || || ||||| || ||||| || || ||| | || | || || Sbjct 22706 ACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCA 22647 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||||| ||||| || || || |||||||| | || | ||||||||||| | Sbjct 22646 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGA 22587 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | ||| ||||||| || || || ||| Sbjct 22586 ATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTT 22527 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || || || || ||||| Sbjct 22526 CCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 >seq306 Length=72094 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || |||||||| || || ||| ||| ||||| || ||||| || || || | || Sbjct 24594 AGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGG 24653 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| ||||| || |||| ||||||||| || | || | |||||| Sbjct 24654 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCC 24713 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | || Sbjct 24714 TTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACCTCGAGGGTG 24773 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | || || || || |||||||| Sbjct 24774 ATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380883280679100