Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq32 174 3e-38 seq1972 87.8 3e-12 >seq32 Length=157973 Score = 174 bits (192), Expect = 3e-38 Identities = 358/522 (69%), Gaps = 23/522 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| ||||| |||||||| ||||| || |||| ||||| |||||| Sbjct 142185 TGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCC 142244 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATAC-ACCCGT-GTCAGGCCCATCTGTTCCAGCA 47957 |||||| ||| ||||||| | || || || || || | |||| || | Sbjct 142245 ATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTA--CCCAAAGAAAGGAGGA 142302 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| || ||| |||||||||||| ||||||| || ||||||||| | ||| | Sbjct 142303 GACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAG 142362 Query 48018 ACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| | || ||||| || | ||||| | || |||| || ||||| | | Sbjct 142363 -CACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATGACG 142421 Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAG------AGCAT 48129 | ||| |||| || | || | || || |||||||| || | || | Sbjct 142422 T-CTT------GGACGGCTT--GCTTGGATGGGC-GGTGCTTGAGATGGGAGAAAAGGAG 142471 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || || || |||| | ||||| || ||| |||||| ||||||||||| ||| Sbjct 142472 GCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAG 142531 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||| | ||||| || | || |||||||| || || | ||||| || ||||||||||| Sbjct 142532 ACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAA 142591 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| ||| ||| | | | || | | |||||||||| Sbjct 142592 GATACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTTCTTGTCTTG 142651 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| | |||||||| ||||||||||| || ||||| Sbjct 142652 GATCCACTTGACAGCCCAGTCGGCCTTCTTCTTAATACATGG 142693 >seq1972 Length=10305 Score = 87.8 bits (96), Expect = 3e-12 Identities = 187/279 (67%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 213887 GTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGC 213946 ||||||||||||||| ||||| || || | ||||| ||||| || || | ||||| || Sbjct 7327 GTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGC 7268 Query 213947 AAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGAT 214003 ||| || || || | |||| || || || || || ||||| ||||||| | Sbjct 7267 AAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAAC 7208 Query 214004 GCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGA 214063 || || | || || | |||||||| | ||||||||| || || || || | || | Sbjct 7207 TCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGT 7148 Query 214064 GGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 || | | || ||| || || || ||||| || | ||| ||||||||||| || Sbjct 7147 AGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACA 7088 Query 214124 GCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162 | ||| ||| || ||| || | || ||||| || Sbjct 7087 AATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTC 7049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931396563328000