Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1291 174 1e-37 seq477 127 1e-23 seq1098 91.5 1e-12 seq306 87.8 1e-11 seq102 87.8 1e-11 >seq1291 Length=26091 Score = 174 bits (192), Expect = 1e-37 Identities = 370/548 (68%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| |||||||| ||| ||| |||| | | | | ||| | | | Sbjct 3112 ATTGGTATCGATTTGGGAACTACCTACTCTTGCGTAGGTATCTTCCGTGATGACAGAATC 3053 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||| |||||||| || | || || || || | ||| |||| || || Sbjct 3052 GAAATTATCGCCAACGACCAAGGAAACCGTACCACTCCTTCCTTCGTTGCTTTCACAGAT 2993 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| || |||||||| || || | |||| || || || | || ||| Sbjct 2992 ACCGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCAATCAACACT 2933 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || |||||||| | |||||||||||||| || | || | || ||| | ||| Sbjct 2932 GTCTTCGATGCTAAGCGTTTGATTGGTCGTAAGTTCGCAGACTCTGAGGTTCAAGCCGAT 2873 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAA 474629 ||| || | || || ||||| || | || || || ||| ||| || | | Sbjct 2872 ATGAAGCACTTCCCATTCAAGGTCATTGACCGTGCCGGAAAGCCAGTTATCGAGGTTGAG 2813 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || | || ||||| |||| ||| |||| ||||| ||| | || | | Sbjct 2812 TTCAAG--GGAGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCTATGATCTTGGTTA 2755 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | |||| | | || || ||| | || || ||| | || | | || || | ||| Sbjct 2754 AGATGAGAGAGACTGCTGAG-GCTTACCTCGGAGGAACTGTCAACAACGCTGTCGTCACT 2696 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 |||||||| || || | ||||||||||||||||| || || || || || ||||| Sbjct 2695 GTTCCAGCTTACTTCACCGATTCTCAACGTCAAGCCACCAAGGACGCTGGTCTCATTGCT 2636 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 |||||||| ||| | ||||| || || ||||| || || || || ||||||| ||| | Sbjct 2635 GGTCTTAACGTTCTCCGTATCATCAACGAACCTACCGCTGCTGCCATTGCTTACGGTTTG 2576 Query 474869 GATAAGAA 474876 || ||||| Sbjct 2575 GACAAGAA 2568 >seq477 Length=47751 Score = 127 bits (140), Expect = 1e-23 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATG-AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609 ||||||||| || || | ||| ||| | || |||| | | || || || | |||| Sbjct 22719 ACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATG-TTGTAGTCGGAAAGAG 22661 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | | ||||||||||||||| |||||||| |||||||||||||||||||| || || | Sbjct 22660 TGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATAC 22601 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728 | ||||||||||||||||| || ||| || ||||| || | || | || | || Sbjct 22600 CCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCA 22541 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||||||||| ||||| ||||| Sbjct 22540 A-AGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTG 22501 Score = 107 bits (118), Expect = 1e-17 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | ||| || | ||||| ||| ||| || || || ||||| | || || Sbjct 22491 ACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGT 22432 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || ||||| || || |||||||| | ||| |||||||| |||||||| || Sbjct 22431 ACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCC 22372 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||| ||||| |||||| || || ||||| | | | | || | Sbjct 22371 TTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGA-CCTCGA 22313 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGA 480762 |||| ||||| ||||| || |||||||| |||| Sbjct 22312 GGGTGATAGTCTTACCAGTAAGAGTCTTGACGA 22280 Score = 89.7 bits (98), Expect = 3e-12 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 |||||| ||||| |||||||| || || ||| ||| || || |||||| | | Sbjct 22207 ACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATG--TTGTAATCACTCAAA 22150 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| |||||||||||||| || ||||| | ||| ||||| ||||| || ||| Sbjct 22149 GTGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATT 22090 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 || ||||| || || ||||| ||||| || || ||||| | | | ||| Sbjct 22089 CCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCA 22030 Query 480729 AGGGTAATAGTTTTACCGGTGA 480750 ||||| || || || ||||||| Sbjct 22029 AGGGTGATGGTCTTTCCGGTGA 22008 Score = 89.7 bits (98), Expect = 3e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || | ||| ||| || || |||||||| | || || Sbjct 22947 ACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGT 22888 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| ||| || | |||||||||||||| || | |||||||| || || || || || Sbjct 22887 TCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACC 22828 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| ||||| ||||| || || || |||||||| | | ||| | Sbjct 22827 CTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAA 22768 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || ||||| | ||||| |||||||| || Sbjct 22767 TGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTG 22729 >seq1098 Length=34876 Score = 91.5 bits (100), Expect = 1e-12 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 474710 TCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGA 474768 || ||||| ||| |||| || || | ||||| ||||||||||||| || || || || Sbjct 28213 TCTTATCTCGGA-AAGACTGTTACCCACGCAGTTGTTACTGTTCCAGCCTACTTCAACGA 28271 Query 474769 TTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTAT 474828 ||| | ||||| ||||| ||||| || | ||||| || | |||||| | ||||| Sbjct 28272 CAACCAAAGACAAGCTACTAAGGATGCTGGTATCATTGCCGGCTTGAATGTTCTCCGTAT 28331 Query 474829 TATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | | |||||||| || || || || ||||||| ||| | || |||| Sbjct 28332 TGTCAATGAACCTACCGCCGCAGCTATTGCTTACGGTTTGGACAAGA 28378 >seq306 Length=72094 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| ||||||||||| || || || | || ||||| || || || ||||| ||||| Sbjct 24656 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 24715 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 |||||| ||||| |||||| || || || || | | | || || ||||| | Sbjct 24716 GTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAA-CCTCGAGGGTGA 24774 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGAACGAC-ATCTTTAAT 480785 | ||||| || ||||| ||||| ||||| || | | | ||| ||||||||| Sbjct 24775 TGGTTTTGCCCGTGAGGGTCTTGACGAAGATCT-GCATGACTATCTTTAAT 24824 >seq102 Length=67028 Score = 87.8 bits (96), Expect = 1e-11 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||||||||||||||| || || | |||||||||||| || |||||||| |||||| Sbjct 14478 TCCTCAAGTTGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTG 14537 Query 480678 TCTTGAATCTT 480688 ||||| ||||| Sbjct 14538 TCTTGGATCTT 14548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267677330231600