Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1972 105 3e-18 >seq1972 Length=10305 Score = 105 bits (116), Expect = 3e-18 Identities = 160/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| || ||| |||| ||| |||||||||| ||||| || | ||| | || | Sbjct 7404 TCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGA 7345 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAA-TCAAAAATATCTGAGTGCCA 26040 | |||||| || ||||| || || ||||| |||||| || |||| ||| | ||||| Sbjct 7344 ACTTCTTCCTTACCGTGGTTTTTGCGCAGATC-AAGAAACTCGAAAACATCCGCATGCCA 7286 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 |||||| | |||| ||||||| ||| | || ||||||||||| || ||||| Sbjct 7285 TGGTTCAAGGTAGACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCT 7226 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 ||||| | ||||||||| | ||| ||||| ||| | |||| Sbjct 7225 GGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC-AATACCGTTG 7183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253003918077500