Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq477 107 3e-18 seq306 95.1 2e-14 >seq477 Length=47751 Score = 107 bits (118), Expect = 3e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | |||||| ||||||||||| || | ||||||||| ||||| || ||||| || Sbjct 22425 ATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTT 22366 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || |||| || | ||| || |||||||||||||| || || || || || Sbjct 22365 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTGAT 22306 Query 193325 AGTTTTACCTGTTAGCGTTTTTAC 193348 ||| ||||| || || || || || Sbjct 22305 AGTCTTACCAGTAAGAGTCTTGAC 22282 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| |||| ||| || || | || || || || |||||| Sbjct 22727 ATACCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCG 22668 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | ||| || || ||||| || | | ||||||||||| Sbjct 22667 GAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGT 22608 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| || |||| || | ||| ||||| || || |||||| Sbjct 22607 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCA 22548 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || || || || || || || || || || |||||||| Sbjct 22547 ACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 >seq306 Length=72094 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | ||| || | ||| |||||||| || || |||| | Sbjct 24630 ATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGC 24689 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || ||||| || || ||||| || |||| || | ||| || || Sbjct 24690 TGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTG 24749 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || ||||| || || || || || || || || ||| Sbjct 24750 TCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGC 24809 Query 193359 AT 193360 || Sbjct 24810 AT 24811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899522825544000