Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq477 140 6e-28 >seq477 Length=47751 Score = 140 bits (154), Expect = 6e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | |||||| | || || || || || | || ||| || || |||||||| | Sbjct 22953 ACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGA-ATGTTATAATCCG 22895 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | | |||| |||| ||||| || || ||||||||||| |||| ||||| || |||| Sbjct 22894 AAAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTG 22835 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || || || |||||||| || ||| || || ||| |||| |||||||||||||| Sbjct 22834 GGATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTA 22775 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||| |||||||| || || || || || || | || |||||||| Sbjct 22774 CTTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || |||||||| || | || || ||| || || || Sbjct 22727 ATACCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCG 22668 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | ||| |||||||||||||| | | |||||||||||| Sbjct 22667 GAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGT 22608 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || || ||||| |||| || || || || Sbjct 22607 GGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCA 22548 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || || || ||||| | || || | || || ||||| Sbjct 22547 ACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984332420295000