Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1972 150 5e-31 seq56 114 4e-20 seq32 113 1e-19 seq688 100 8e-16 >seq1972 Length=10305 Score = 150 bits (166), Expect = 5e-31 Identities = 568/881 (64%), Gaps = 19/881 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| ||||| ||| ||||| ||||| || | ||||| ||||| Sbjct 7681 GTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGGTT 7622 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || |||| || ||||| ||||| || ||| | ||| |||| ||||| | || || Sbjct 7621 GCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGC 7562 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| ||||| || Sbjct 7561 CTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTGCGACCCTTGCCTGCCTT 7502 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 |||||| |||| || | ||| | | | ||||| || ||| ||| || |||||| Sbjct 7501 CTCATAACTTTCGTAGAGAGCCTC--GAACTCCTCGCCATAAACATCTGCCAAGCCAGGG 7444 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATA 155925 |||| || ||||| | || | ||| | || | || ||||||| ||| |||| Sbjct 7443 CACTCATTCGGGCACATCAAAGTCCACTCTCCGTT--CTTTTCAACACGCTTCATGAATA 7386 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 |||| ||| | |||||||| || || | ||| || || | ||||| | Sbjct 7385 GATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCGTGGT 7326 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 | || || || || | || || || ||| | ||| ||| || || || | ||||| Sbjct 7325 TTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAA 7266 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || |||| | |||| ||||| ||||| ||||| | ||||| || ||||| || | Sbjct 7265 AAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTC 7206 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAA-TATGCGAACCAGA 156160 |||||||||| |||||| ||||| | || ||||| || |||| ||||| ||||| Sbjct 7205 GGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGC--ACCAGT 7148 Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCG 156218 | |||| | ||||| | || ||||||||||| | ||| || || || || Sbjct 7147 AGCACGAATTCTGTGAATGTTAAGACCAATACCACC--AGCATTCTTCGAGATCATGGCA 7090 Query 156219 CATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAG 156278 || ||| | ||||| | | ||||| |||||| || || | ||| | || || Sbjct 7089 CAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAG 7030 Query 156279 CACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATA 156338 || || | ||| | | |||| || || || || ||||| || | || || || Sbjct 7029 CATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTA 6970 Query 156339 AAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGA 156398 || ||||| || ||||| | | || || || || | || | | | |||||| Sbjct 6969 AAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGA 6910 Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458 |||| | | || | ||| ||| || || ||||||||| ||| ||||||| Sbjct 6909 ATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCATCAAGA 6850 Query 156459 CGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || | || |||| || || || || || ||||||||||| Sbjct 6849 CGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATA 6809 >seq56 Length=107310 Score = 114 bits (126), Expect = 4e-20 Identities = 256/382 (67%), Gaps = 7/382 (2%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| | ||||| | ||| || ||| | || |||| ||| || || | Sbjct 71564 CTATCAAAACGACCAGGTCTCATTAGAGCCTTGTCAAGTACGTCGGGTCTATTGGTACCA 71623 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | |||||||| || || || || || ||||| || ||||||||||| Sbjct 71624 GCAAGAACAACAATTTGCTCAGTCGTGTTGAAACCGTCCATCTCAGTCAAAATTTGATTG 71683 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA---TCACCCGAATCGCTCCttttt 289026 ||||| ||||| |||||| ||| ||||| ||| |||| || | | | Sbjct 71684 AGTGTAGCTTCCCGTTCATCGTTTCCACCTCCAGAAAACCCACCGGACTTTCCACGAGAC 71743 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || || | |||||| ||||| |||||||| || | ||| |||| | | | ||| || || Sbjct 71744 TTTCCGATAGCATCGATTTCATCAATGAAGATAATACAAGGAGTACTCTTTCTGGCCATA 71803 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 || || | || | || | |||||||||| ||||||| |||| || || ||||| ||| Sbjct 71804 GCGAAAAGATCCCGAACTCTCGATGCTCCAACACCAACAAACATCTCGACGAATTCGGAA 71863 Query 289147 --GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | || ||| || ||||| ||| | | ||| || ||| |||| | |||| | | Sbjct 71864 CCACTGACACT--AAAGAATGGTACTTGAGATTCACCAGCTGTTGCCTTTGCCAACAAAG 71921 Query 289205 TCTTACCTGTTCCAGGTGGTCC 289226 | ||||| || || |||||||| Sbjct 71922 TTTTACCAGTACCTGGTGGTCC 71943 >seq32 Length=157973 Score = 113 bits (124), Expect = 1e-19 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 |||| |||||||| ||||| | ||||||||| | || |||||||| |||||| | | Sbjct 142695 TTCCATGTATTAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATCCAAGACAAGAACTCCA 142636 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| |||||||| ||||| |||| || ||||| || || ||| ||| | | Sbjct 142635 CCTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGATCCT 142576 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 || || || |||||||| || ||||||||| | | | || || || || |||| Sbjct 142575 TCGCTTCCATCTTTTGGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCAACG 142516 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 |||| || || | || || | ||||||||||| || || Sbjct 142515 AACTCATCTCCCGTGATGAAGGTCTTCACACCGATTTCGC 142476 >seq688 Length=49541 Score = 100 bits (110), Expect = 8e-16 Identities = 174/253 (69%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| ||| ||| | ||| || ||| ||||||| || | ||| | || | Sbjct 35599 ATGAGTCCACAGATATCACAGATATGAACTCTGAAAGCATCCGAAACCTCAAACAGTCTC 35658 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| | |||||||| ||||||||||||||||| ||||| || |||||| Sbjct 35659 TCCTTCAAGAAAGCACTAGCACCGTGAGAAATCATACAATCACGTTCCATCTCTCCGAAA 35718 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 |||||||||||||| | ||| | ||| || | || || | || ||| | | ||| Sbjct 35719 CGAAGACCACCATCTCTAGCACGACCTTCCACGGGTTGTCTGGTTAGAATTTGTACGGGA 35778 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || ||| ||| ||| ||| || | ||||| || | ||| ||||| ||| | Sbjct 35779 CCTCTGGCACGGGCATGAATCTTGTCGTCGACCATGTGACGCAAACGTTGGTAATATGTG 35838 Query 251647 GGACCGATGAAGA 251659 || || | ||||| Sbjct 35839 GGGCCAAGGAAGA 35851 Score = 86.0 bits (94), Expect = 2e-11 Identities = 112/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || ||||||||| |||||||| |||||||||||||| | || || | | Sbjct 36031 TGTGCAATTGTCATACGAGATGGAATAGCGTGGGGATTGATGATAAGATCTGGAACTACT 36090 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGT--TTCCAATAGTTCCCTTT 251955 || || |||||| ||||| |||| || | ||| |||| | || ||||| ||||| Sbjct 36091 CCCTCTCTAGTGAACGGCATGTCCTGTTGC---ATATATGTAATACCGATAGTACCCTTC 36147 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| ||| || || |||||||| Sbjct 36148 TGTCCGTGACGTGAAGCAAATTTGTCACCAAT 36179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471596965342900