Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq32 116 5e-20 seq1392 107 2e-17 >seq32 Length=157973 Score = 116 bits (128), Expect = 5e-20 Identities = 144/194 (74%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 |||||| || || ||| | ||||||| |||| ||| |||| |||||| || ||||| Sbjct 142493 ACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGACCACGCTT 142552 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||||||||||| ||| || ||||| ||||| ||||| || || || || Sbjct 142553 CTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACAGCAGCGAA 142612 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 ||| ||| || | ||||||||| ||| | | |||| ||||||||| | |||| Sbjct 142613 AGCGACGAGACGTTGAGCAAAGGTG--GAGTTCTTGTCTTG--GATCCACTTGACAGCCC 142668 Query 869358 AGTCGGCCTTTTTC 869371 |||||||||| ||| Sbjct 142669 AGTCGGCCTTCTTC 142682 Score = 105 bits (116), Expect = 8e-17 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || | | |||||| ||||||||||| || | | ||||| Sbjct 142179 GCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATA 142238 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| || | || | Sbjct 142239 TTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACCCAAAGAAAGG 142298 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || ||||| || ||||||||||| || ||||||| || ||||||||| | | Sbjct 142299 AGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAG 142358 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | |||| ||| ||||||| || |||||||| || ||| |||| Sbjct 142359 AGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATG 142418 Query 868931 A 868931 | Sbjct 142419 A 142419 >seq1392 Length=21419 Score = 107 bits (118), Expect = 2e-17 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| ||||||||| | || ||||| | || |||||| |||| || ||| Sbjct 19258 GCTGCCAACTACCTTGACATCAAGGCCCTTCTCGACGTCGGATGCAAGACTGTTGCAAAC 19317 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| || || || |||||||| |||||||| || || |||| Sbjct 19318 ATGATCAAGGGAAAATCCCCAGAGGAGATTCGCAAGACATTCAATATCA 19366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106179043208900