Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq477 152 5e-32 seq306 127 2e-24 seq102 93.3 4e-14 >seq477 Length=47751 Score = 152 bits (168), Expect = 5e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || ||||| | ||||||||| | | Sbjct 22726 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACATTAGAAGTAGAATCGTCA 22785 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | || ||||||||| || || || || || ||||| || Sbjct 22786 GATACTATCGATAACGTTAAGGCTAA-GATCCAAGATAAGGAGGGTATCCCACCCGACCA 22844 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| ||||||||||| || || ||| |||||||| |||| | | || |||||||| Sbjct 22845 ACAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGATGGCAGAACCCTTTCGGATTATAA 22904 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||||||||||||||||| | ||||||||| Sbjct 22905 CATTCAAAAGGAATCGACATTGCACTTGGTG 22935 Score = 138 bits (152), Expect = 1e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| ||||| || ||||| || || | |||| || | || | Sbjct 22285 AAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCGACAAT 22344 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| ||||| || |||||||||||||| |||||||| ||| Sbjct 22345 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGATTTTT 22404 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| ||||| || |||||| | | | | || ||||| ||||||||||||||||| Sbjct 22405 GCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGGAATCT 22464 Query 24899 ACACTACACTTGGT 24912 || || ||||| || Sbjct 22465 ACCCTTCACTTAGT 22478 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || | || || || | | Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || || || |||||| Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || || || || ||| | | | || || || ||| Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || |||| ||||| Sbjct 22678 ATCCAAAAGGAATCAACCTTACATTTGGT 22706 >seq306 Length=72094 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || ||||| || || | | Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||||||||| || ||||| || ||||| ||| Sbjct 24751 GACACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAA 24692 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || || || || ||| | | | | || || || ||| Sbjct 24691 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAAC 24632 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || ||||||||||| || Sbjct 24631 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACG 24597 >seq102 Length=67028 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24689 AAACTGATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTC 24748 |||||||| |||| || | | ||| | || || || || || || || || || || Sbjct 14645 AAACTGAT-GATATAATA-ATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTT 14588 Query 24749 GAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGA 24808 || || || || | ||||| | || | || || |||||||||||||| || ||| Sbjct 14587 GAGGTCGAGTCCTCTGACACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGA 14528 Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || || ||||||||||||||||||||||| || || || || || ||||| | | Sbjct 14527 ATTCCCCCCGATCAACAACGTTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACT 14468 Query 24869 ATGTCAGATTATAACATTCAAAAGG 24893 | ||||| || ||||| ||||||| Sbjct 14467 CTCTCAGACTACAACATCCAAAAGG 14443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449831802476000