Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq32 104 4e-16 seq1392 98.7 2e-14 >seq32 Length=157973 Score = 104 bits (114), Expect = 4e-16 Identities = 140/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| || || ||| | ||||||| ||| ||| |||| |||||| || ||||| Sbjct 142493 ACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGACCACGCTT 142552 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||||||||||| | ||| || ||||| ||||| ||||| || || || || Sbjct 142553 CTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACAGCAGCGAA 142612 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| || | ||||| ||| || | | | | | ||||||||| | ||||| Sbjct 142613 AGCGACGAGACGTTGAGCAAAGGTG--GAGTTCTTGTCT-TGGATCCACTTGACAGCCCA 142669 Query 794520 CTCTGCCTTTTTC 794532 || ||||| ||| Sbjct 142670 GTCGGCCTTCTTC 142682 Score = 91.5 bits (100), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| ||||||||||| || | | ||||| |||||| | ||| |||||||| Sbjct 142205 CTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGC 142264 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 | ||||| ||| ||| || | || || || || ||||| ||||| || || Sbjct 142265 AGATTTGTAGTACTTGTCGTTACCCAAAGAAAGGAGGAGACGATCGGCAACGAACTCGAT 142324 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGAC 794104 ||| || ||||||| || ||||||||| | ||| || || || | |||| | | Sbjct 142325 GTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAA 142384 Query 794105 AAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 ||||||| || |||||||| || ||| |||||| Sbjct 142385 GAACTCTTGTTCAATCTCGACAGCTTCGGTGATGA 142419 >seq1392 Length=21419 Score = 98.7 bits (108), Expect = 2e-14 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||| ||||||||| |||| ||||| | || |||||||| || || ||| Sbjct 19258 GCTGCCAACTACCTTGACATCAAGGCCCTTCTCGACGTCGGATGCAAGACTGTTGCAAAC 19317 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||| || || || ||||| || |||||||| || || |||| Sbjct 19318 ATGATCAAGGGAAAATCCCCAGAGGAGATTCGCAAGACATTCAATATCA 19366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915001817636300