Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq477 114 1e-20 >seq477 Length=47751 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || | || ||||| ||||||||||||||||||| || ||| | Sbjct 22941 ACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCC 22882 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || |||||| | ||||||| ||| || || || || |||||||| || Sbjct 22881 ATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTT 22822 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || || || | || | ||| || || ||||||||| | || || Sbjct 22821 ATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAATGTAAT 22762 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || || || |||||||| Sbjct 22761 GGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || || ||||| || ||||| ||||||||||| ||||| | | ||| || ||| Sbjct 22481 AGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCC 22422 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||||||||| || ||| | ||||| | || ||||| || ||||| || || |||||| Sbjct 22421 TCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCT 22362 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | || || ||| || || || || || ||||| Sbjct 22361 TGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTC 22302 Query 29755 TTGCCAGT 29762 || ||||| Sbjct 22301 TTACCAGT 22294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385164270149700