Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1291 212 5e-49 seq870 134 1e-25 seq784 100 2e-15 seq1098 89.7 4e-12 >seq1291 Length=26091 Score = 212 bits (234), Expect = 5e-49 Identities = 491/732 (67%), Gaps = 10/732 (1%) Strand=Plus/Plus Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 ||||| ||||| || | |||| | | |||||||| || || || || ||||| || Sbjct 2387 TTTTCGTTTGAATTCATTAACAAAGTGGTTAACAAGACGGTTGTCGAAGTCCTCACCACC 2446 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 ||| | ||||| || | || | | || | ||| | || || |||| | |||||| Sbjct 2447 CAAGTGAGTATCACCAGCGGTGGACTTGACCTCGAAGATACCTTCCTCAATGGTCAAAAG 2506 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || |||||| |||||| ||||| | ||| || || || || || ||| || Sbjct 2507 AGAAACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGTTCACCCTCAAT 2566 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || || | ||| || |||| |||||||| || ||||| || || || | | ||| Sbjct 2567 CTTCTTGTCCAAACCGTAAGCAATGGCAGCAGCGGTAGGTTCGTTGATGATACGGAGAAC 2626 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 |||||||||||||| || || || || |||||||| | ||| |||||| | || || Sbjct 2627 GTTAAGACCAGCAATGAGACCAGCGTCCTTGGTGGCTTGACGTTGAGAATCGGTGAAGTA 2686 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509 || |||||||| | || || | |||| || | ||| | ||||| || || | Sbjct 2687 AGCTGGAACAGTGACGACAGCGT-TGTTGACAGTTCCTCCGAGGTAAGCCTCAGCAGTCT 2745 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569 | |||| ||| || ||||| || || |||| |||||| | |||||||| ||| Sbjct 2746 CTCTCATCTTAACCAAGATCATAGAAGAGATTTCTTCTGGTGTGAATTGCTTG--TTCTC 2803 Query 282570 T---TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCC 282626 | |||| | | || || | | ||| || || | ||| || || ||||| Sbjct 2804 TCCCTTGAACTCA-ACCTCGATAACTGGCTTTCCGGCACGGTCAATGACCTTGAATGGGA 2862 Query 282627 AATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTT 282685 | | |||||||| | |||||| || | ||| || | | |||||| || || || Sbjct 2863 AGTGCTTCATATCGGCTTGAAC-CTCAGAGTCTGCGAACTTACGACCAATCAAACGCTTA 2921 Query 282686 GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATC 282745 ||||| || | ||| ||| |||| || | || |||| | ||||| |||||||| ||| Sbjct 2922 GCATCGAAGACAGTGTTGATTGGGTTCATGGCGACTTGGTTCTTGGCGGCATCTCCGATC 2981 Query 282746 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 282805 ||| | || || ||||| || | ||| | || ||||| || || || ||||| || || Sbjct 2982 AGACGCTCGGTATCTGTGAAAGCAACGAAGGAAGGAGTGGTACGGTTTCCTTGGTCGTTG 3041 Query 282806 GCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 282865 || |||||||| | | | ||| | | | |||||| ||| | || ||||| ||| Sbjct 3042 GCGATAATTTCGATTCTGTCATCACGGAAGATACCTACGCAAGAGTAGGTAGTTCCCAAA 3101 Query 282866 TCAATACCAATA 282877 || ||||||||| Sbjct 3102 TCGATACCAATA 3113 Score = 113 bits (124), Expect = 3e-19 Identities = 247/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || |||||||| | ||| |||||||| ||||||||||| || || | | |||||| Sbjct 1518 ATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAACACCACGTGGTGCAGGT 1577 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | ||| | |||| | || || || || ||| || || ||| Sbjct 1578 GGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 1637 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||||| | ||| || || ||| ||| || || || | || | || || Sbjct 1638 CCCTCGAAGACTTGAATGAGGACACCAGGTTGGTTGTCAGAGAAGGTAGAGAAGACCTCA 1697 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || |||||||| ||| | |||||||| |||||||| Sbjct 1698 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATTTGTCCACCAGCA 1757 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738 || || | ||| ||||| | || | |||||| | |||| || | || | | || Sbjct 1758 GTCTCAATACCGAGAGACAATGGCGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 1817 Query 281739 CA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | ||| | |||| ||||| || ||||| | ||| ||||| ||||||||||| ||| Sbjct 1818 GAGGAAGTGTCACCAGAGAGAATGGCAGCTTGGACAGCGGCACCGTATGCAACAGCCTCA 1877 Query 281798 TCAGGATT 281805 ||||| || Sbjct 1878 TCAGGGTT 1885 >seq870 Length=91401 Score = 134 bits (148), Expect = 1e-25 Identities = 110/134 (82%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | | |||||||||||||||||||||||||| | ||||| ||| Sbjct 21491 GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 21550 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||||| ||| || |||| |||| ||||||||||||| || |||| Sbjct 21551 ACTGTCATTACTGGTGATCCCAATCTTTCTCTTGATGAGGTTGGTGTTCCTCGCAGTATT 21610 Query 432408 GCGAAAAATCTTAC 432421 || | || |||||| Sbjct 21611 GCAAGAATTCTTAC 21624 >seq784 Length=33356 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| ||||||||||| || || | | ||| | ||| || | ||||||| Sbjct 23329 CCGTAAGCAAGAGCGGCAGCAGTTGGCTCGTTGACGACTCTGAGAACGTTCAAACCAGCA 23388 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| || ||||| || |||||||| | ||| |||||||| || || || ||||| ||| Sbjct 23389 ATTTGACCAGCATCCTTGGTGGCTTGACGTTGGGAATCGTTGAAGTAGGCTGGAACGGTA 23448 Query 282464 ATAACGGCAT 282473 | |||||||| Sbjct 23449 ACAACGGCAT 23458 >seq1098 Length=34876 Score = 89.7 bits (98), Expect = 4e-12 Identities = 204/305 (67%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| |||||||| |||||||| | ||| | || | |||| || | ||| | || Sbjct 28515 ATCGAAATCTTCTCCTCCCAAGTGAGTGTCACCGGCAGTAGAAAGAACCTCGAAGACACC 28456 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | |||| || | ||| | ||||||| ||||| ||||| | ||| | | | || Sbjct 28455 GTGATCAATGGAGAGAAGGGAAACATCAAAAGTTCCTCCACCAAGATCGTAGACGA-TAA 28397 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | | | | || | || || | ||| || |||| ||| || || || ||||| Sbjct 28396 TTTGACGT--TCGCCTCCAGTCTTGTCCAAACCGTAAGCAATAGCTGCGGCGGTAGGTTC 28339 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| | ||| | | |||||| | || ||||| | || ||||| ||||| |||||||| Sbjct 28338 ATTGACAATACGGAGAACATTCAAGCCGGCAATGATACCAGCATCCTTAGTAGCTTGTCT 28279 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 ||| ||||| || || || |||||||||| ||| || | || || ||||| | Sbjct 28278 TTGGTTGTCGTTGAAGTAGGCTGGAACAGTAACAACTGCGTGGGTAACAGTCTTTCCGAG 28219 Query 282493 ATAAG 282497 ||||| Sbjct 28218 ATAAG 28214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740055979444200