Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq477 150 4e-31 >seq477 Length=47751 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| || ||||| || || || |||||||| || || |||| || Sbjct 22941 ACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTGCC 22882 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || |||||||||||||| | || |||||| || || || || || ||||| Sbjct 22881 ATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTCCTT 22822 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| ||||| || || || || || || ||||| | ||||||||| || || || Sbjct 22821 ATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAATGTAAT 22762 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| || || |||||||| Sbjct 22761 GGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || | || ||||| || || || || || || | Sbjct 22726 TACCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGG 22667 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| ||||| || ||||||||||| || | ||||||||| || | Sbjct 22666 AAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTG 22607 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| || || ||||| || || || || | || | Sbjct 22606 GGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAA 22547 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || || | ||||| || || || ||||| Sbjct 22546 CCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||||||||| || |||||||| || || || || ||||| || || | | || || Sbjct 22481 AGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCC 22422 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || |||||||| || ||||| || | | |||||||| ||||| || |||||||| ||| Sbjct 22421 TCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCT 22362 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| || || ||||| || || ||||| || || || || | || || ||| Sbjct 22361 TGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTC 22302 Query 82779 TTGCCTGTCAACGTCTTTAC 82798 || || || | ||||| || Sbjct 22301 TTACCAGTAAGAGTCTTGAC 22282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981680017966300