Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1972 206 6e-48 seq32 105 2e-17 >seq1972 Length=10305 Score = 206 bits (228), Expect = 6e-48 Identities = 531/799 (66%), Gaps = 11/799 (1%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||| || || || || | ||| | | ||| | ||||| | | Sbjct 6809 TATTTCGGGTTCAAGACCCTCGAGCGATCATATCTCTTACGTCTTGATGGCAAAGTTGCA 6868 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || ||||| ||||| ||| | | |||||||| |||||||||| || |||| || || Sbjct 6869 GAGCGTCCACAACAGATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATCGAA 6928 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||| ||| |||| | | | || ||| | || || ||| | || || Sbjct 6929 AGTGCTATCGAAACTTATAACTTGATGTCCAACAAGTACTTTACACACGCTTCCCCAACA 6988 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || ||| ||||| ||| || |||| | | || ||||| || | | || || Sbjct 6989 CTCTTTTCGGCAGGTACTCCACAAGCACAACTTTCATCATGCTTCCTCATCGATATGAAG 7048 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || || |||||| ||||| || ||| || || |||| ||| | || || || || Sbjct 7049 GAGGACAGTATTGATGGTATCTACGATACT-TTGAAGATTTGTGCCATGATCTCGAAGAA 7107 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| || |||||| || || |||| ||||| | | || ||| | ||||| Sbjct 7108 TGCTGGTGGTATTGGTCTTAACATTCACAGAATTCGTGCTACTGGTGCATACATCGCTGG 7167 Query 110663 AGCGAAGGGTG-CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || || || |||| | | ||||||| ||| | |||| |||||| ||||||| | Sbjct 7168 TACCAACGGAAACTCCAACGGTA-TTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCA 7226 Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| ||||||||||| ||| | ||| | |||||| |||| || ||||| | Sbjct 7227 GATATGTCGATCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTCTACCTTGAACCAT 7286 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 ||||| | ||| | || || || | || || || ||||| || || |||||| Sbjct 7287 GGCATGCGGATGTTTTCGAGTTTCTTGATCTGCGCAAAAACCACGGTAAGGAAGAAGTTC 7346 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 | ||||| ||| | || ||||| |||||||| | ||| |||||||||| |||||| || Sbjct 7347 GTGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAA 7406 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 | || || |||| || | ||||| || || | ||||| | | ||||| |||| Sbjct 7407 AGAACGGAGAGTGGACTTTGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGTTTATG 7466 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACAA 111017 | | ||||| || | || ||||||| ||||| || | ||||||| |||||| || | Sbjct 7467 GCGAGGAGTTCGAGGCTCTCTACGAAAGTTATGAGAAGGCAGGCAAGGGTCGCAAGACTA 7526 Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 || | || ||| | ||||||| | || ||||| | ||| || || |||| || Sbjct 7527 --TCAAGGCACAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACCGAGACCGGAAACCC 7584 Query 111077 TTATATTTTGTATAAAGAT 111095 || || | || |||||| Sbjct 7585 TTTCATGCTTTACAAAGAT 7603 >seq32 Length=157973 Score = 105 bits (116), Expect = 2e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854 ||||| ||||| || || |||||| | || ||||| ||||| | | | | ||| || Sbjct 142687 ATTAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATCCAAGACAAGAACTCCACCTTTGCT 142628 Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914 | | || || ||||| ||| |||||| ||||| ||||| || || | ||| | | Sbjct 142627 CAACGTCTCGTCGCTTTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGATCCTTCGCTTCC 142568 Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATC 131974 ||||||||||| ||||||||||| | ||| | || ||| | || ||||| || ||||| Sbjct 142567 ATCTTTTGGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCAACGAACTCATC 142508 Query 131975 TCGAGAGATGAAG 131987 || | ||||||| Sbjct 142507 TCCCGTGATGAAG 142495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186634889343700