Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq306 102 2e-16 seq477 84.2 5e-11 >seq306 Length=72094 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || ||||| ||||| | || || || ||| ||| Sbjct 24808 CAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 24749 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||| ||||| || || ||||| || ||| || Sbjct 24748 ACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAACAG 24689 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||||||||| | |||||||| | || | |||| |||||| || Sbjct 24688 CGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAACATC 24629 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTT 206381 || || ||||| ||||||||| | || || Sbjct 24628 CAAAAGGAGTCCACTCTTCACTTGGTGTT 24600 >seq477 Length=47751 Score = 84.2 bits (92), Expect = 5e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251 |||| ||||| || ||||| | || || ||| ||| || || |||| || ||| Sbjct 22008 TCACCGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGG 22067 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||||| || || || || ||||| || ||| || | | || |||||||||| Sbjct 22068 CCAAGATCCAGGATAAGGAGGGAATCCCACCTGACCAACAGCGTTTGATTTTCGCCGGAA 22127 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 |||| | || ||||| | |||||| ||||||||| |||| || ||||| ||||| | Sbjct 22128 AGCAACTTGAGGATGGCCGCACTTTGAGTGATTACAACATCCAAAAGGAGTCCACTCTCC 22187 Query 206372 ACCTTGTTTTGAGACTTCG 206390 | |||||| | | ||||| Sbjct 22188 ATCTTGTTCTCCGCCTTCG 22206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181643637675700