Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq477 129 6e-25 seq306 125 7e-24 >seq477 Length=47751 Score = 129 bits (142), Expect = 6e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| ||| | ||| | || ||||| || Sbjct 22473 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCGGAGAGGGTACGGCCATCCTCGAGTTG 22414 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||||||||||||||| |||||||| || |||||||| || ||||| || || Sbjct 22413 TTTACCGGCAAAAATCAAACGCTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTT 22354 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | || ||||| || || || ||||| || || || ||||| || Sbjct 22353 GGCCTTGACATTGTCGATGGTATCGGAAGACTCGACCTCGAGGGTGATAGTCTTACCAGT 22294 Query 134690 TAAAGTTTTAACGA 134703 | ||| || |||| Sbjct 22293 AAGAGTCTTGACGA 22280 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || ||||||||||| |||||||||||| || ||| | || || || || Sbjct 22700 TGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGC 22641 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || ||||| || || || || || || |||||||| || Sbjct 22640 TTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTG 22581 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | ||||| || || || || || | ||| || || || || || Sbjct 22580 GCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTTCCAGTG 22521 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| |||||||| Sbjct 22520 AGAGTCTTGACGAAGATTTGCAT 22498 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGG-TGTG 134554 || || | ||| | ||| | || ||||||||||||||||| || || || || | || Sbjct 22943 AGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGAAAGGGTTCTG 22884 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | ||| || || ||||| ||||| || || || ||||| || || || || Sbjct 22883 CCA-TCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGGATACCCTC 22825 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| || || || || || | || || |||||||| || || | || Sbjct 22824 CTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTACTTCTAATGT 22765 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || ||||| || || || |||||||| ||||| Sbjct 22764 AATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| |||||||| |||||||| || | | ||| | || || Sbjct 22194 ACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCATCCTCA 22135 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || |||||||||||||| || || || || || || || || || || Sbjct 22134 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGTGGGATTCCCTCCTTATCCTGG 22075 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||||| ||||| || || || || ||||| || Sbjct 22074 ATCTTGGCCTTGACGTTGTCGATGGTATCGGAAGATTCAACCTCAAGGGTGATGGTCTTT 22015 Query 134685 CCGGT 134689 ||||| Sbjct 22014 CCGGT 22010 >seq306 Length=72094 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || ||||| | ||| || ||||| |||||||| |||||||||||| Sbjct 24585 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAG 24644 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || ||||| || || || || || ||||| ||||| || ||||| || Sbjct 24645 AGGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGG 24704 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | |||||| || || || || Sbjct 24705 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTGTCCGAAGACTCAACC 24764 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || |||||||| || || | || || ||||| || ||||| Sbjct 24765 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505324485484000