Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1972 277 2e-69 seq32 109 8e-19 >seq1972 Length=10305 Score = 277 bits (306), Expect = 2e-69 Identities = 1324/2073 (64%), Gaps = 65/2073 (3%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||| |||| || || | | ||||||| ||||||||| ||||| |||| Sbjct 8631 GTGAATTGAATAGGTGCTGAAGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAG 8572 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| || || |||||| ||| | ||| | ||||| || Sbjct 8571 CCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 8512 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| ||||| |||||| ||||||||| || || || | ||| || ||||||| | Sbjct 8511 TGAATGTTCATTGATTGAGATTGATCGATAAACGCACCACGATCAGCAGCCATTTGAACG 8452 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || | ||||| ||||||||||| ||||| ||| ||||| ||| |||||| | Sbjct 8451 ATTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 8392 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | | |||||||| ||||||||||| | || || || || || | || | Sbjct 8391 TTGGGGATGTTTTGAATAGATCCACCATCCGCGATGATACGGTTTTTCATGTTGTCGGAC 8332 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || | | || | | | ||||| || || || | |||||| || ||| Sbjct 8331 CAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATGGGTTGACGACTTGAAACTCTCCA 8272 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | | || | ||| | || || || || ||||| || | | ||||||| || Sbjct 8271 GCAAGAACACGACGGGAATAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCA 8212 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT-CTAAGACC 68849 |||||||| | ||| ||||||||||||||||| || || || | | || | || || Sbjct 8211 AGAATTTGGGAAGTACTGGCAGTTGGCATAGGTGCAAC-AAGAAGCGAGTTGCGAACTCC 8153 Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATT 68909 ||| |||| | || | | | ||||||||| | |||| ||| |||| Sbjct 8152 GTGTTGCTTGATGGATTGCTTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACC 8093 Query 68910 CCAAAGATCGTATTGTAGAATTCCGTT----ACTTGCATATGATCCATTATATGTTTCAT 68965 ||| | || ||||| || || || ||| | || || | || || || | Sbjct 8092 CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGG----GAGCCTTGGTAAGTCTCGT 8037 Query 68966 AAGGTCC---TTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTG 69022 | || || ||||| | || | | || | || || ||| ||| || || | Sbjct 8036 ATGGGCCAAGTTCCTTTGCAACC--TCGACGGATGAGGTC-AAGGCAGCGTGGTAGATGG 7980 Query 69023 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAA 69081 | |||||||| | | || |||| |||| |||||| | || |||||| | | || Sbjct 7979 TCTCGAAAATTTGAATGTTAAGATGCTTG-GCTTCTGGGGAGTCAAATGGAAGACG-AAG 7922 Query 69082 AG--AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | || ||| ||||| || | || ||||| |||| | ||||||||| || | || Sbjct 7921 GGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAAT 7863 Query 69140 TTGAACTTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 | | |||| | ||||||||| ||||| || || || || || || || || | ||| Sbjct 7862 T-GCTTTTTCTGGCTTCTGGAACGGGATAGTAGTTGATGTCAATGATCTTGTTCAAGTTT 7804 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATC 69251 | || || |||| ||| || || | || || | ||||| | || | ||| Sbjct 7803 CTAACAACAACTTGAACAACCTCGTGAAGCTTCTGGAAATCGTAAGTTCCCTCATTCATG 7744 Query 69252 TATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATT 69311 | | ||||| | | || | || || | |||||| || ||||||| | Sbjct 7743 T-TGACAAAAGTTGGTAACGCAATGGAAGCCAAGTTACAACAAGCAACCTCATCCGG--- 7688 Query 69312 TGCA---TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 |||| || | | |||||||| || | || || || || || || || | Sbjct 7687 TGCAGAGTACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTT 7628 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 || || ||||| ||||| || || || |||||||| || || || | || || || | Sbjct 7627 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGT 7568 Query 69429 CTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT 69488 |||| || | |||||| | ||||| || || || |||||| || ||| Sbjct 7567 TTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATA---GTCTTGCGACCCTT 7511 Query 69489 CTCT---TTTTCATA--TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCC 69543 || || ||||| || ||| | |||| ||||| || || || ||||||| || Sbjct 7510 GCCTGCCTTCTCATAACTTTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCC 7453 Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTC 69603 || ||||| || ||||| || |||||||| | |||| | | | | | ||| || ||| Sbjct 7452 AAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTC 7393 Query 69604 ATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATT 69662 || |||||||| |||||||| | || ||| |||||||| | | | | |||||| || Sbjct 7392 ATGAATAGATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCACGAACTTCTTCCTT 7334 Query 69663 TCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 69722 || ||||| ||||| |||||||| | || ||| | |||||||||||| || || Sbjct 7333 ACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTA 7274 Query 69723 TATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATT 69782 | || | | || || || || || || || ||||| | |||||||||||||| || Sbjct 7273 GACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTT 7214 Query 69783 ATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACT 69842 | |||| ||||| |||| |||||| || || || || || || |||| || || Sbjct 7213 GAAAACTCGGAGCATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGC 7154 Query 69843 TCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAG 69902 || | || ||||| | ||| ||||| || || || || | || ||||| | Sbjct 7153 ACCAGTAGCACGAATTCTGTGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCAT 7094 Query 69903 AGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAG 69962 |||||| ||||| || || || ||||| || || || || || |||| | | || Sbjct 7093 GGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAG 7034 Query 69963 AAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTG 70022 || || || | ||| ||| ||| || || ||| | ||| || || ||||| Sbjct 7033 GAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTG 6974 Query 70023 AGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACT 70081 || || | || | || | || || || ||||| ||||| ||| || || ||| Sbjct 6973 TGTAAAGTACTTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACC 6914 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 | ||||| || | || |||||||| | ||| || || || || ||| | ||| || Sbjct 6913 G-TGAATACCAACGGCAACACGCATGATCATCTGTTGTGGACGCTCTGCAACTTTGCCAT 6855 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAA 70199 | || || |||||| || || || || ||||| ||||| | ||| ||||| Sbjct 6854 CAAGACGTAAGAGATATGATCGCTCGAGGGTCTTGAACCCGAAATATTGGTAGTTGAAA- 6796 Query 70200 GTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCAT 70259 |||| || || | || |||| || |||| || | || | | |||| | || | | Sbjct 6795 -TCTCGGTCATAGACGATGGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCGT 6738 Query 70260 AACAGTAGGTGAGATAATC---GGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAA 70316 | ||| | | ||||| |||||| | | |||||| | || || ||| | | | Sbjct 6737 A--AGTTTGCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTA 6680 Query 70317 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGC 70376 |||||| || || | |||| |||| || |||| ||||| | ||||| | || Sbjct 6679 TAAATCGCGGATAACGTGGGAAAATTGTTTCTTGGTTTGTTTGTGAAGGTTTGAGACTGC 6620 Query 70377 TATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 || | || |||||||| ||||| || ||||| Sbjct 6619 AATACGAGCAGCTAGAATGGCATAATCGGGATG 6587 >seq32 Length=157973 Score = 109 bits (120), Expect = 8e-19 Identities = 304/459 (66%), Gaps = 12/459 (3%) Strand=Plus/Plus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 |||||| || |||||||| |||||||| | |||||||| || || || || || | Sbjct 142169 CATAACACCAGCCTTTTGGTAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGC 142228 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 ||| || ||||| |||||||| || || || || | | || || | || | || Sbjct 142229 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACC 142288 Query 39433 TAATTCTGAAATCAAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 || |||| | | ||| ||||| || || |||||| ||||| | | | Sbjct 142289 CAAA---GAAAGGAGGAGACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGA 142345 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 ||||| || | ||| | || |||||||| || | ||||||| ||| || || || Sbjct 142346 GTTCATGCCCAAGAGAGCACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGAC 142405 Query 39550 GGCCTCTGTTATTATCGATGTT--ACTACCT-CATCACTCGGTGGATGCAATAAATGTTT 39606 || || || || | || | || || | | | | | || || ||| | ||| Sbjct 142406 AGCTTCGGTGATGA-CG-TCTTGGACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGA 142462 Query 39607 AAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGA 39666 || | | ||| ||||| || || || || ||||| | || | |||||| || Sbjct 142463 GAAAAGGAGGCATGCGAAATCGGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGA 142522 Query 39667 AAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCC 39726 || ||||| || | ||| ||||||||||| ||||||||||| |||| ||| || ||||| Sbjct 142523 GAAGGTGAGACCGGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCC 142582 Query 39727 AGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| |||||||| || || || || || || || || || Sbjct 142583 AGAGAAGAAGATACCCTCAACAGCAGCGAAAGCGACGAG 142621 Score = 102 bits (112), Expect = 1e-16 Identities = 180/262 (69%), Gaps = 9/262 (3%) Strand=Plus/Plus Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| || |||||||| || ||| || || || ||||| || ||||| || || | | Sbjct 142827 TTTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCTAGCCTCTGGGA 142886 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| || || || ||||| || |||| || || || || |||||||| || | Sbjct 142887 TTTGAACTTCGCCACTGAATCTCTCAACCAAGTTCTCGTTGACAATTCCATCGGATGCTG 142946 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATAT------TTTTCATCGGGTGTCAATTTAT 40085 | || ||||| | || || ||| || || | |||| | || || | || Sbjct 142947 CGAAGAATGCGAGGACGTGGGAAATGAAGTAACGCTCGTCGTCATTGAGTCTC---TCAT 143003 Query 40086 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145 ||||||| | | ||| ||||||| ||| | ||||| || ||||| || || ||||||| Sbjct 143004 TCCAGTCGTGAAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTG 143063 Query 40146 CCTTTTTGTACATGTTCCATAT 40167 |||| |||||||| | ||| || Sbjct 143064 CCTTCTTGTACATTTGCCAGAT 143085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686808339588000