Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1972 122 7e-23 seq477 104 2e-17 >seq1972 Length=10305 Score = 122 bits (134), Expect = 7e-23 Identities = 310/469 (66%), Gaps = 7/469 (1%) Strand=Plus/Minus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 || ||||| | | |||| | ||||||| |||||| |||||||| || | ||| || | | Sbjct 7434 GGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATC 7375 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || || || || || ||||| | || ||||| |||| |||| || | Sbjct 7374 CACAAGGCATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCGTGGTTTTTGCGCAGA 7315 Query 131735 TTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTG 131794 | | ||| || |||| ||||||||||| ||||| | || || || | || || | Sbjct 7314 TCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCAGGG 7255 Query 131795 CGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGC 131851 ||||| ||| ||||||| |||| | | |||||||| | || || | ||| || Sbjct 7254 CGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGA 7195 Query 131852 TCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTG 131911 | | |||||||| |||||| ||||| | ||||| ||| | || | ||| || Sbjct 7194 ACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGAATTCTG 7135 Query 131912 TGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTG 131971 |||| ||| || |||||||| || | | || ||||| | || || | | | ||| Sbjct 7134 TGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTA 7075 Query 131972 TTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGT 132031 | |||||||| || | |||||| | || |||| | ||||| || || | ||| Sbjct 7074 TCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTGT 7015 Query 132032 --TGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAA 132078 | ||| | || || || ||||| | ||| ||| ||||||||||| Sbjct 7014 GCTTGTGGA--GTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAA 6968 >seq477 Length=47751 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||||||||| || || || ||||| || ||||||||| | |||| | ||||| Sbjct 22706 ACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCA 22647 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || ||||| || | || ||||| |||||||| || || | |||||| || || Sbjct 22646 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTGTCTTGA 22587 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | || | |||||| | | ||||| || | ||| || | || Sbjct 22586 ATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTT 22527 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || || |||||||||||| Sbjct 22526 CCAGTGAGAGTCTTGACGAAGATTTGCATA 22497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424873807010400