Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1972 230 3e-55 seq32 116 5e-21 >seq1972 Length=10305 Score = 230 bits (254), Expect = 3e-55 Identities = 1118/1745 (64%), Gaps = 55/1745 (3%) Strand=Plus/Minus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | || |||||| | | |||||||| | || ||| Sbjct 8593 ATAGTACATTCCGGTCTTCAAGCCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTT 8534 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| | |||| | |||||| |||| ||| || || || ||| | Sbjct 8533 GCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAA-CGCAC 8475 Query 110488 C-CGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTAATTTCCCAAACTGTGCGATA 110544 | || | || ||||| | || || || || | |||||||||||| || || Sbjct 8474 CACGATCAGCAGCCATTTGAACGATTGTTCGTTGAGA--AATTTCCCAAACGGTCTTGTA 8417 Query 110545 GAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCAC 110604 || |||||| ||| |||| || | | ||| || || || || || || || | Sbjct 8416 AAGGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCCGCGAT 8357 Query 110605 CATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTG 110664 || | | ||||| | | |||||||||||| || | ||||| |||| ||| Sbjct 8356 GATACGGTTTTTCATGTTGTCGGACCAGAGACCCATATCGACAAGGTCCTTGAGGAGCCA 8297 Query 110665 CTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTA 110724 |||||| | |||||| || || || | | |||||||| | ||||| Sbjct 8296 TGGGTTGACGACTTGAAACTCTCCAGCAAGAACACGACGGGAATAGATGTTCGAAGTGTA 8237 Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTG 110783 ||| || || |||||||| | |||||| |||| | || ||| |||||||| |||| Sbjct 8236 TGGCTCGAAACATTCATTGA-AGCCAAGAATTTGGGAAGTACTGGCAGTTGGCATAGGTG 8178 Query 110784 CCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT 110843 | | | ||| ||| |||| || | | ||||||| || ||| | | |||||| | Sbjct 8177 CAACAAGAAGCGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAATCCCAAT 8118 Query 110844 CGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GAC 110899 | | | || | ||| | || ||||||||||| | || || | ||||||| ||| Sbjct 8117 CCCACAAGTCAG-TAGGTGTAACAC-CCCACATGTCATATTGGAGTTCACCCTTGGAGAC 8060 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGC 110958 ||||| || | | || || || | || | | | || | || || | | Sbjct 8059 TGGGGAG--CCTTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCAACCTCGACGGATGAG 8002 Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018 || ||| | ||||| || ||||| || || || || || | | ||||||||| Sbjct 8001 GTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGATGCTTGGCTTCTGG 7943 Query 111019 TGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 111073 || ||||||| || || | || ||| |||| || |||||||||||||| Sbjct 7942 GGAGTCAAATGGAAGACGAAGGGCCAAGAAAG-----CATCAGCAAGACCTTGAACACCA 7888 Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATT 111132 | | | ||||||| ||| || | ||| |||| || ||| ||||||||| | || Sbjct 7887 ACAGCGATAGGTCGGTGACGGAAATTGCTTTTTCTGGCT-TCTGGAACGGGATAGTAGTT 7829 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 ||||||||| ||| | ||| | ||||| | | || ||||| || | Sbjct 7828 GATGTCAATGATCTTGTTCAAGTTTCTAACAACAACTTGAACAACCTCGTGAAGCTTCTG 7769 Query 111193 ATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCCAA 111249 |||| |||| | ||| ||||| ||||| | |||| | || || || ||||| Sbjct 7768 GAAATCGTAAGTTCC---CTCATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGCCAA 7712 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || ||| ||| ||||||| | | |||||| | ||| ||||| || |||||||| Sbjct 7711 GTTACAACAAGCAACCTCATCCGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTTGGA 7652 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 ||| ||| || || | ||||||||||| |||||||||||||| ||||| ||||| || Sbjct 7651 ACTGCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAG 7592 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||| || || | | ||||||| | ||||| | | | | Sbjct 7591 CATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGTGC 7532 Query 111429 C-TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 | || || | || | ||| | ||| || ||| || || |||||| || || || Sbjct 7531 CTTGATAGTCTTGC---GACCCTTGCCTGCCTTCTCATAACTTTCGTAGAGAGCCTCGAA 7475 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 |||||| || | || | | || || || | || || | | || ||| | Sbjct 7474 CTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCACTC 7415 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || | ||||| ||||||||||| || || |||||||||| || | |||||||| Sbjct 7414 TCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAAGAGATC 7355 Query 111607 TC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665 | | || ||| | ||||| | ||| ||||| || | ||||| ||||| | | || Sbjct 7354 GCGTGCA-CGAACTTCTTCCTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAACAT 7296 Query 111666 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTTTCGACGCCCAGCTT 111719 |||| |||||||| ||||| ||||| || | || || ||| | ||| ||| Sbjct 7295 CCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCAGGGCGCTTGTTA---CCACCTT 7239 Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779 ||| ||||| | || ||| ||| || || || ||||| |||| |||||| | || | Sbjct 7238 GATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAGT 7179 Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839 || || || || || | | | || | | || |||| | |||| Sbjct 7178 TTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGAATTCTGTGAATGTTAAGACCAA 7119 Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899 |||| ||||| ||| ||||| ||||| | | | ||| | |||||||| | | Sbjct 7118 TACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAA 7059 Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959 | ||||||||| | |||| |||||||| || | || | | ||| ||||| | Sbjct 7058 TACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCTG 6999 Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTC 112018 | ||||| ||||| | ||||| | || ||| | | ||||||| || || || Sbjct 6998 CCGAAAAGAGTGTTGGGGAAGCGTGTGT-AAAGTACTTGTTGGACATCAAGTTATAAGTT 6940 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078 || | || || ||||| || ||||| || || | || || ||||||| ||| | Sbjct 6939 TCGATAGCACTTTCGATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATCTGT 6880 Query 112079 TGTGG 112083 ||||| Sbjct 6879 TGTGG 6875 >seq32 Length=157973 Score = 116 bits (128), Expect = 5e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||| ||||| ||||| || ||||| || |||||| ||||| | ||||||||| Sbjct 142487 GTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGACC 142546 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | |||| | || | ||| || || ||||||||||||||||| ||| Sbjct 142547 ACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACAGC 142606 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTG 122848 || || || | || |||| || |||| | ||| ||| | | | ||| || | | Sbjct 142607 AGCGAAAGCGACGAGACGTTGAGCAAAGGTG-GAGTTCTTGTCTTGGATCCACTTGACAG 142665 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | |||||||||| ||||||||| || Sbjct 142666 CCCAGTCGGCCTTCTTCTTAATACATGGAAC 142696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627940150320000