Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1972 170 2e-37 seq32 145 9e-30 >seq1972 Length=10305 Score = 170 bits (188), Expect = 2e-37 Identities = 1115/1753 (64%), Gaps = 73/1753 (4%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| ||||| || | ||||| || | | |||| Sbjct 8592 TAGTACATTCCGGTCTTCAAGCCCAATTTCCAACCAGCAAAGTGCATAGATGTGATCTTG 8533 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 8532 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAACGCACCA 8473 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || | | ||| | || ||||||| || ||| |||| | Sbjct 8472 CGATCAGCAGCCATTTGAACGA--TTGTTCGTTGAGAAATTTCCCAAACGGTCTTGTAAA 8415 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 || ||| || ||| |||| || | ||| ||||| || |||||||| || || | Sbjct 8414 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCCGCGATGA 8355 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138 | | | ||||| | | ||||||||||| || | || |||| | ||| ||| Sbjct 8354 TACGGTTTTTCATGTTGTCGGACCAGAGACCCATATCGACAAGGTCCTTGAGGAGCCATG 8295 Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTA 118198 | |||| || |||||| || || || || | |||||| || | ||||| Sbjct 8294 GGT--TGACGACTTGAAACTCTCCAGCAAGAACACGACGGGAATAGATGTTCGAAGTGTA 8237 Query 118199 TGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257 |||||| || || |||||| | |||||| |||||| || ||| || ||||| |||| Sbjct 8236 TGGCTCGAAACATTCATTGA-AGCCAAGAATTTGGGAAGTACTGGCAGTTGGCATAGGTG 8178 Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317 | | ||||| ||| || | || | || | | ||| || ||| | || ||||| | Sbjct 8177 CAACAAGAAGCGAGTTGCGAACTCCGTGTTGCTTGATGGATTGCTTCAAAGAATCCCAAT 8118 Query 118318 CGTAGTTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375 | | | || | || | | | |||||| ||| | ||||| ||| | ||| | Sbjct 8117 CCCACAAGTCAG-TAGGTGTAACACC-CCACATGTCATATTGGAGTTCACCCTTGGAGAC 8060 Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCC------CT---CAACCTCCGCCAATTCGGA 118426 ||| || || | | ||||| |||||||| || ||||||| | || || Sbjct 8059 TGGGGAGCCTTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCAACCTCGACGGAT---GA 8003 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 | || | ||| ||||| || || || || ||||| || || | |||||| Sbjct 8002 GGTC------AAGGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGATGCTTGGC 7949 Query 118487 CTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 || ||| ||||| | || || | | || || |||| || |||||||| ||| Sbjct 7948 TTCTGGGGAGTCAAATGGAAGACGAAGGGCCAAGAAAG--CATCAGCAAGACCTTGAACA 7891 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGATAAAA 118603 || | | || || || || | | ||| || | || ||| | ||||||| | Sbjct 7890 CCAACAGCGATAGGTCGGTGACGGAAATTGCTTTTTCTGGCT-TCTGGAACGGGATAGTA 7832 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 || | || || | | | || | ||| | ||||| | | || |||||||| Sbjct 7831 GTTGATGTCAATGATCTTGTTCAAGTTTCTAACAACAACTTGAACAACCTCGTGAAGCTT 7772 Query 118664 TTCGTAATCAAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGC 118720 | | |||| || | | ||| ||||| ||||| | | || | || || || || Sbjct 7771 CTGGAAATCGTAAGTTCC---CTCATTCATGTTGACAAAAGTTGGTAACGCAATGGAAGC 7715 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780 || ||||| || ||||||| ||| |||||| | ||| || ||||||||||| Sbjct 7714 CAAGTTACAACAAGCAACCTCATCCGGTGCAGAGTACTCGACAATCTCTGTGCACAAGTT 7655 Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840 ||||| |||||| || | ||||||||| || ||| |||| || ||||| ||||| Sbjct 7654 GGAACTGCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTA 7595 Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 118899 ||||||| | || | || ||||| ||||| | || ||||||| | ||| | | | | Sbjct 7594 AAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCTTTTG 7535 Query 118900 CAGCTGGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTC 118957 || | | || | ||| || ||| ||| ||| || || |||||| || || Sbjct 7534 TGCCTTG-ATAGTCTTGCG-ACCCTTGCCTGCCTT-CTCATAACTTTCGTAGAGAGCCTC 7478 Query 118958 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 119017 ||||| || || | |||| | || || || || ||||| | | || ||| Sbjct 7477 GAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCATTCGGGCACATCAAAGTCCA 7418 Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077 | || || ||||| ||||||||||| || || || ||||| | || ||||||| Sbjct 7417 CTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCATAGAAGAG 7358 Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 ||| || ||| ||||||| | || || || |||| || | ||| || | | Sbjct 7357 ATCGCGTGCACGAACTTCTTCCTTACCGTGGTTTTTGCGCAGATCAAGAAACTCGAAAAC 7298 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGC 119191 |||||| ||||| ||||| ||||| || || | | || | | || |||| | Sbjct 7297 ATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACC---AGGGCGCTTGTTACCACC 7241 Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251 || | ||||| || |||||| ||| || || || ||||| |||| ||||| | ||| Sbjct 7240 TTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGA 7181 Query 119252 TTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATC-GTGGATGTGCAT 119308 | || || || || ||| || | || | | || | || || ||| |||| | Sbjct 7180 GTTTCCGTTGGTACCAGCGATGTATG-CAC-CAGTAGCAC-GAATTCTGTGAATGTTAAG 7124 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 ||||||||| || || ||| ||||| || || | | | | | ||||||| || Sbjct 7123 ACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACC 7064 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTG 119427 ||| || ||| |||| | ||||||||||||| || | ||| || || || | Sbjct 7063 ATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTG-TGCTTGTGGAG 7005 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCG 119486 |||| || ||||| ||||| | ||||| | || ||| | | ||||||| || Sbjct 7004 TACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGT-AAAGTACTTGTTGGACATCAAGTTA 6946 Query 119487 TAGGTCTCCA-AG-ACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 119544 || || || | || || | ||||| || ||||||||||| | | || ||||| | Sbjct 6945 TAAGTTTCGATAGCACTTTCG--ATGTCATCACCGTGAATACCAACGGCAACACGCATGA 6888 Query 119545 ACATGTATTGGGG 119557 ||| | ||| || Sbjct 6887 TCATCTGTTGTGG 6875 >seq32 Length=157973 Score = 145 bits (160), Expect = 9e-30 Identities = 340/511 (67%), Gaps = 4/511 (1%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| | ||||||||||||||| ||||| || ||||| |||||||||||| Sbjct 142188 TAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCATG 142247 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || |||||||| || || | | ||| | || | || |||||||| Sbjct 142248 AAGTCGAATGGGTTGGCAGATTTGTAGTACTTGTCGTTACCCAAAGAAAG--GAGGAGAC 142305 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||| | ||| |||| ||||| | ||| | ||||||||| || | ||| || Sbjct 142306 GATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAGCAC 142365 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || || || || | |||| | | ||||| || |||||||| | || | | | Sbjct 142366 AAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATGACGTCTT 142425 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 | | || | | || || | | | | ||| || || || || Sbjct 142426 GGACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAGAAAAGGAGGCATGCGAAATCGG 142485 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| ||||| || ||||||||||||||||| || |||||| ||||| | |||||||| Sbjct 142486 TGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACCGGCCATGAGAC 142545 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | ||| || || | | || || |||||||||||||| ||||| ||| Sbjct 142546 CACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGATACCCTCAACAG 142605 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCG 130205 ||||| || | |||||| | |||||||| | | ||| | | |||||| | | Sbjct 142606 CAGCGAAAGCGACGAGACGTTGAGCAAAGGTGGAGTTCTTGTCTTGGATCCACTTGACAG 142665 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 |||| | ||||| |||| ||||| || || Sbjct 142666 CCCAGTCGGCCTTCTTCTTAATACATGGAAC 142696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618344753852000