Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1291 215 2e-50 seq477 156 1e-32 seq870 93.3 1e-13 seq1911 89.7 2e-12 >seq1291 Length=26091 Score = 215 bits (238), Expect = 2e-50 Identities = 488/732 (67%), Gaps = 15/732 (2%) Strand=Plus/Minus Query 349201 TATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGT 349260 ||| || |||||||| || ||||| || ||||| || | | | | | |||| | | Sbjct 3113 TATTGGTATCGATTTGGGAACTACCTACTCTTGCGTAGGTATCTTCCGTGATGACAGAAT 3054 Query 349261 AGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGA 349320 ||||| || || || || ||||| ||| | || || || || | |||||| || || || Sbjct 3053 CGAAATTATCGCCAACGACCAAGGAAACCGTACCACTCCTTCCTTCGTTGCTTTCACAGA 2994 Query 349321 AACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATAC 349380 || |||||| |||| || ||| | || || || |||| || || |||| || || Sbjct 2993 TACCGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCAATCAACAC 2934 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATC 349437 || || ||||||||||| | |||||| | | || | ||| ||| ||| | Sbjct 2933 TGTCTTCGATGCTAAGCGTTTGATTGGTCGTAAGTTCGCAGAC---TCTGAGGTTCAAGC 2877 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT---AAACCAATTAT 349494 ||| | || || || || || | || || ||| ||| || ||| |||| Sbjct 2876 CGATATGAAGCACTTCCCATTCAAGGTCATT------GACCGTGCCGGAAAGCCAGTTAT 2823 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||||||| | || || || | || ||||| ||| |||||||| || || ||| | Sbjct 2822 CGAGGTTGAGTTCAAGGGAGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCTATGAT 2763 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || ||||| |||| || | |||||| || || | || | ||| || | | ||||| Sbjct 2762 CTTGGTTAAGATGAGAGAGACTGCTGAGGCTTACCTCGGAGGAACTGTCAACAACGCTGT 2703 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | ||||| ||||| || || | ||| | || ||| || || || || ||||| Sbjct 2702 CGTCACTGTTCCAGCTTACTTCACCGATTCTCAACGTCAAGCCACCAAGGACGCTGGTCT 2643 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || | || ||||| | || || || ||||| || ||||| || ||||| || Sbjct 2642 CATTGCTGGTCTTAACGTTCTCCGTATCATCAACGAACCTACCGCTGCTGCCATTGCTTA 2583 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || | || || | || ||| ||| || |||| || || ||| | ||||| || Sbjct 2582 CGGTTTGGACAAGAAGATTGAGGGTGAACGTAACGTTCTCATCTTCGATCTTGGTGGAGG 2523 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 || || ||||| || || | || |||| || || || || || || || | || || Sbjct 2522 AACCTTCGATGTTTCTCTTTTGACCATTGAGGAAGGTATCTTCGAGGTCAAGTCCACCGC 2463 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||||||| || | ||||| || || || || || ||||| ||| || |||||||| Sbjct 2462 TGGTGATACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGTTAACCACTTTGTTAA 2403 Query 349915 AGAATTTAAGCG 349926 ||||| || || Sbjct 2402 TGAATTCAAACG 2391 >seq477 Length=47751 Score = 156 bits (172), Expect = 1e-32 Identities = 161/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||||||||| ||||| ||||| ||||| || || | Sbjct 22220 TTTGCATACCACCACGAAGGCGGAGAACAAGATGGAGAGTGGACTCCTTTTGGATGTTGT 22161 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||| || || || ||||| |||||||| ||||| || || || | ||| || || | Sbjct 22160 AATCACTCAAAGTGCGGCCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGT 22101 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || ||||| || |||||||| || || || || || || || || | ||| || | Sbjct 22100 CAGGTGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAAG 22041 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||||| ||||| || | ||||||||||| Sbjct 22040 ATTCAACCTCAAGGGTGATGGTCTTTCCGGT 22010 Score = 141 bits (156), Expect = 3e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | ||| ||||| | ||||| ||||| || |||||||| || | Sbjct 22504 TTTGCATACCACCACGAAGTCTGAGAACTAAGTGAAGGGTAGATTCCTTTTGAATGTTGT 22445 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || |||||||| || ||||| || | ||| || |||| Sbjct 22444 AATCGGAGAGGGTACGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGCTGTTGAT 22385 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || || || || || || || ||||| || || | ||| || | Sbjct 22384 CGGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAAG 22325 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || || | ||||| || || || || || || Sbjct 22324 ACTCGACCTCGAGGGTGATAGTCTTACCAGTAAGAGTCTTGAC 22282 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||| | || || || ||||| || || || || Sbjct 22728 CATACCACCACGAAGACGAAGGACCAAATGTAAGGTTGATTCCTTTTGGATGTTGTAGTC 22669 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||||||||| || ||||||||||| |||||||| |||||||| Sbjct 22668 GGAAAGAGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGG 22609 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || || ||||| || || || ||||| || || | || |||| || Sbjct 22608 TGGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCGATAGTGTCCGATGACTC 22549 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || | || | ||||||||| || || || || || || || ||||| Sbjct 22548 AACCTCCAAAGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 22498 Score = 136 bits (150), Expect = 1e-26 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || | || || || |||||||| |||||||| || Sbjct 22953 ACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTATAATCCGA 22894 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | |||| ||||| || | || |||||||||||||| | ||||| || || || || Sbjct 22893 AAGGGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGG 22834 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || ||||| || || ||||| || || ||||| || | ||| || | ||| || Sbjct 22833 GATACCCTCCTTATCTTGGATCTTAGCCTTAACGTTATCGATAGTATCTGACGATTCTAC 22774 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| | ||||| ||||||||||| | || || || ||||||||||| Sbjct 22773 TTCTAATGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 22726 >seq870 Length=91401 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| |||||| | ||||| ||| ||||| | || ||||| || ||||| || || Sbjct 23814 CGTGGGACACCAAGAGTAACGTTC---TTAGACGAAATACCAGTGAAATGGAAGGTGTTC 23758 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | ||| | ||| || | || |||||||| ||||| || |||| || |||||||| || Sbjct 23757 AAAGTCATTTGTGTGGCTGGTTCACCAATAGACTGTGCAGCAAGCACACCAACCATCTCA 23698 Query 377578 CCAGGATTGACAATAGC 377594 ||||||||||| | ||| Sbjct 23697 CCAGGATTGACCAAAGC 23681 >seq1911 Length=53192 Score = 89.7 bits (98), Expect = 2e-12 Identities = 506/793 (64%), Gaps = 43/793 (5%) Strand=Plus/Plus Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624 |||||||||||||| |||| | || || | | || | || || || ||||| Sbjct 26115 ATGAAGGAAATTGCCGAAGTTAAGTTGGGCAAGAAGGTCGAGAAGGCCGTCATCACTGTT 26174 Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684 ||||| || || || || ||| ||| || || || |||||||| |||||| || Sbjct 26175 CCAGCTTACTTCAACGACAACCAACGTCAAGCTACCAAGGATGCTGGTGCCATTGCTGGT 26234 Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT---T 349741 | || ||||| | || || || || || |||||||| || || || || || || | Sbjct 26235 CTTAACGTTCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATCGCTTACGGTCTCGGT 26294 Query 349742 GATAAAATGAGTGACCAAGaaaaa----aaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 | | || ||| |||| || | || |||| || | ||| | |||||||| || Sbjct 26295 GCTGGAA--AGT--CCAACAAGGAGCGTAACGTTCTCATCTACGATCTCGGTGGTGGAAC 26350 Query 349798 TTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 ||| ||||| || || || |||| | ||| || | || || || || ||||||| Sbjct 26351 TTTCGATGTTTCCCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTCAAGGCTACTGCTG 26409 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGAT---AATCGTCTCGTTTCGCATTTTGTTA 349913 |||| || ||| | || || ||||||| ||| || | |||| | || || | Sbjct 26410 GTGACACCCATTTGGGAGGTCAAGATTTCGATACCAACCTCCTCGAT---CACTTCAAGA 26466 Query 349914 AAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 | || || | | | | || | || | | | || | || | ||||| | Sbjct 26467 AGGAGTTCACCAGAAAGACCAAGAAGGACTTGTCCAACGACCCCCGTGCTCTCCGTCGTC 26526 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA--- 350030 | |||||||| || |||||||||||| | || | | ||| | |||||| Sbjct 26527 TCAGAACTGCTTGCGAACGTGCTAAGAGAACCCTCT------CTAACGGTGCCTCTACTA 26580 Query 350031 ---TTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCT 350086 |||| || ||||| |||| | ||||| | || ||| | | || || |||||| Sbjct 26581 ACGTTGAGATCGATTC-CTTGTTCGATGGTGAGGACTTCAATGCTCAAATCACCCGTGCT 26639 Query 350087 CGGTTTGAAGA-ATTA--TGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAA 350143 | || || || ||| | || |||| | | || |||| ||||| | | | Sbjct 26640 AGATTCGAGGACCTTAACGCCAAGG--CTTTCT-CCGGTACTTTGGACCCTGTTGGACAG 26696 Query 350144 GTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGT 350203 || | || ||||| || || || | || |||| ||| | ||| | || |||||| Sbjct 26697 GTTCTCAAGGATGCCAACATTGATAAGAGCAAGGTTGACGAAATCGTTCTTGTCGGTGGT 26756 Query 350204 TCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT 350263 ||||| ||||| ||||| ||||| || | | |||||| ||| | | ||||| | Sbjct 26757 TCTACCCGTATCCCAAAGATTCAAAAGCTCTTGAGTGAGTTCTTTGACAAC-AAGAA-GT 26814 Query 350264 TCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTA 350321 | ||| | || || || ||||| |||||||| || |||||||||||||| || || Sbjct 26815 TGGAGAAGAGCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCTGTTCAAGCTGGTA 26874 Query 350322 TTTTATCTGGAAA 350334 | | || ||||| Sbjct 26875 TCCTTTCCGGAAA 26887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515027253895100