Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1972 196 5e-45 seq32 109 6e-19 >seq1972 Length=10305 Score = 196 bits (216), Expect = 5e-45 Identities = 404/594 (68%), Gaps = 8/594 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCG--CGAGACATA 19173 ||||||| || || || || || || || || ||| || | ||| | ||| || || Sbjct 6888 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATC--GAAAGTGCTATCGAAACTTA 6945 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 || ||||| | | |||| ||| || ||||| | || || || || || ||||| Sbjct 6946 TAACTTGATGTCCAACAAGTACTTTACACACGCTTCCCCAACACTCTTTTCGGCAGGTAC 7005 Query 19234 GA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292 |||| | || | || || ||||| | | ||||||||| ||||| ||||| | Sbjct 7006 TCCACAAGCA-CAACTTTCATCATGCTTCCTCATCGATATGAAGGAGGACAGTATTGATG 7064 Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352 | |||||||| || | ||| || || ||||| ||| | || ||||| || Sbjct 7065 GTATCTACGATACTTTGAAGATTTGTGCCATGATCTCGAAGAATGCTGGTGGTATTGGTC 7124 Query 19353 TCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 | || | | | | || || | | |||| || ||| ||| || |||||| || Sbjct 7125 TTAACATTCACAGA-ATTCGTGCTACTGGTGCATACATCGCTGGTACCAACGGAAACTCC 7183 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 ||||||| || || |||||||| || ||||||||||| ||||| || ||| | || || Sbjct 7184 AACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTCGATCAAGGT 7243 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 || ||| ||| || | || || ||||||| || |||||||| ||||| || | Sbjct 7244 GGTAACAAGCGCCCTGGTGCTTTTGCTGTCTACCTTGAACCATGGCATGCGGATGTTTTC 7303 Query 19532 GATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC 19591 || || || || |||||| ||||| ||| | || || | || ||||| |||||| Sbjct 7304 GAGTTTCTTGATCTGCGCAAAAACCACGGTAAGGAAGAAGTTCGTGCACGCGATCTCTTC 7363 Query 19592 ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCAC 19651 |||||||||||||| || ||||||||| || ||||| ||| ||| ||| ||| Sbjct 7364 TATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAACGGAGAGTGGACT 7423 Query 19652 CTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 ||||||||||| | || ||||||||| | | || || || ||||||| |||| Sbjct 7424 TTGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGTTTATGGCGAGGAGTTC 7477 Score = 188 bits (208), Expect = 8e-43 Identities = 882/1381 (64%), Gaps = 42/1381 (3%) Strand=Plus/Minus Query 78535 TAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAG 78594 |||||||| | ||||| ||||||||| || ||| || | || |||| || | Sbjct 8253 TAGATGTTCGAAGTGTATGGCTCGAAACATTCATTGAAGCCAAGAATTTGGGAAGTACTG 8194 Query 78595 GCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACC 78654 || || ||||| ||||| || || || || || |||| || || |||||| | Sbjct 8193 GCAGTTGGCATAGGTGCAACAAGAAGCGAGTTGCGAACTCCGTGTTGCTTGATGGATTGC 8134 Query 78655 TTTAGGCCGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGG 78708 || | |||||| || ||| | | | | ||||||||||| ||| || Sbjct 8133 TTCAAAGAATCCCAATCCCACAAGTCAGTAGGTGTAACACCCCACATGTCATATTGGAGT 8074 Query 78709 ATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGT 78768 ||||| ||| | || || || | | | |||||||| | || ||||| || | Sbjct 8073 TCACCCTTGGAGACTGGGGAGCCTTGGTAAGTCTCGTATGGGCCAAGTTCCTTTGCAACC 8014 Query 78769 TCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 ||| || | || ||| |||||||| | | |||||| || |||| || | | Sbjct 8013 TCGACGGATGAGGTCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGAT-G 7955 Query 78829 CGCGCCTTG-GTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 | | ||| | ||| || | ||| | || || ||| |||| || || || || Sbjct 7954 CTTGGCTTCTGGGGAGTCAAATGGAAGACGAAGGGCCAAGAAAGCATCAGCAAGACCTTG 7895 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGG-T 78946 || || | |||||| |||||||| || | ||||| |||| ||| | | | |||| | Sbjct 7894 AACACCAACAGCGATAGGTCGGTGACGGAAATTGCTTTTTCTGGCTTC-TGGAACGGGAT 7836 Query 78947 AAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACA 79006 | |||| || |||| ||||| ||| | || || || ||||||| | Sbjct 7835 AGTAGTTGATGTCAATGATCTTGTTCAAGTTTCTAACAACAACTTGAACAACCTCGTGAA 7776 Query 79007 ATTTGGCGAAATCAAAA------TGATTTCCTTTGATGAAAGTCGGTAG-GCACAGCGAT 79059 || |||||| || | ||| |||| ||||| |||| ||| | || Sbjct 7775 GCTTCTGGAAATCGTAAGTTCCCTCATTCATGTTGACAAAAGTTGGTAACGCAATG-GAA 7717 Query 79060 GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAA 79119 |||| ||| || || ||| ||||| ||| ||||| || ||||||||||| Sbjct 7716 GCCAAGTTACAACAAGCAACCTCATCCGGTGCAGAGTACTCGACAATCTCTGTGCACAAG 7657 Query 79120 TTAGACGACTTG--ATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCT 79177 || || ||| ||||| || | |||||| ||||||||||||| ||| || || || | Sbjct 7656 TTGGA--ACTGCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTT 7599 Query 79178 TGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGT 79237 |||| |||| | || | |||||||| ||| || |||| || ||| | | Sbjct 7598 TGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCTCAAGAATAGAGTACCAAAGCT 7539 Query 79238 CCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGC--GACGT------ACGTCCGGTA 79289 | ||| || | ||||| ||||||| ||| | | | || | || || Sbjct 7538 TTTGTGCCTTGATAG---TCTTG---CGACCCT-TGCCTGCCTTCTCATAACTTTCG-TA 7487 Query 79290 CAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349 | | | ||| |||| ||||| ||||| | || ||| |||||||| | ||||||||| Sbjct 7486 GAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACTCATTCGGGCACAT 7427 Query 79350 CAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGC 79409 || ||| || ||| ||| ||||| || |||||| || || || ||||||| ||| Sbjct 7426 CAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGC 7367 Query 79410 CGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAA 79469 |||||| ||||| ||| | || || | || ||||| ||||| || ||||| Sbjct 7366 ATAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCGTGGTTTTTGCGCAGATCAAGAAA 7307 Query 79470 GTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCC 79529 || | | || || ||||| || || || |||| || || | ||| ||||||| Sbjct 7306 CTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCACCAGGGCGCTTGTT 7247 Query 79530 GCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 || || || | ||| || | ||| ||||||||||||||||||||||| || || || || Sbjct 7246 ACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACC 7187 Query 79590 GTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GT 79648 || || | ||||| || || ||| || ||| | || ||||| | | | | || Sbjct 7186 GTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGAAT-TCTGTGAATGT 7128 Query 79649 GGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGA 79708 | || || || || | ||| ||||| || || ||| | || ||||||| Sbjct 7127 TAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTTCAAAGTATCGTAGA 7068 Query 79709 TGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGT 79768 | || || || ||| ||||||||| ||| |||||||| || | ||| | |||| Sbjct 7067 TACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGAAAGTTGT-GCTTGT 7009 Query 79769 -TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGA 79827 ||||| || ||||| || || | ||||| || ||| |||| | | ||||| Sbjct 7008 GGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAAGTACTTGTTGGACATCAAG 6949 Query 79828 TCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATG 79887 | || || || | | | || ||| || ||||| || || || || || |||||| Sbjct 6948 TTATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCAACGGCAACACGCATG 6889 Query 79888 A 79888 | Sbjct 6888 A 6888 >seq32 Length=157973 Score = 109 bits (120), Expect = 6e-19 Identities = 114/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 ||||| ||||||||| | ||||| || ||| || || || |||||||||||||| || || Sbjct 142633 TTTGCTCAACGTCTCGTCGCTTTCGC-TGCTGTTGAGGGTATCTTCTTCTCTGGATCCTT 142575 Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091 | | | || || |||||||| |||||||| |||||| | || || | ||||||||||| Sbjct 142574 CGCTTCCATCTTTTGGCTCAAGAAGCGTGGTCTCATGGCCGGTCTCACCTTCTCCAACGA 142515 Query 60092 GCTGATTTCCCGGGACGAGGGCCTCCA 60118 || || ||||| || || || || || Sbjct 142514 ACTCATCTCCCGTGATGAAGGTCTTCA 142488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548444578248000