Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1972 176 5e-39 seq1126 111 2e-19 seq32 86.0 7e-12 >seq1972 Length=10305 Score = 176 bits (194), Expect = 5e-39 Identities = 398/592 (67%), Gaps = 6/592 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| |||||||| ||| | ||| || || || Sbjct 6888 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATCGAAAGTGCTATCGAAACTTATA 6947 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 |||| ||| | | ||||||||||| ||||| | ||||| || || || ||||| Sbjct 6948 ACTTGATGTCCAACAAGTACTTTACACACGCTTCCCCAACACTCTTTTCGGCAGGTACTC 7007 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | || |||||||| | | |||||||| ||| || || || | Sbjct 7008 CACAAGCACAACTTTCATCATGCTTCCTCATCGATATGAAGGAGGACAGTATTGATGGTA 7067 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || | ||| |||||| ||||| ||| | |||||||| ||| | Sbjct 7068 TCTACGATACTTTGAAGATTTGTGCCATGATCTCGAAGAATGCTGGTGGTATTGGTCTTA 7127 Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | ||| | ||||| | || || ||| || || ||||| | || | Sbjct 7128 ACATTCACAGAA--TTCGTGCTACTGGTGCATACATCGCTGGTACCAACGGAAACTCCAA 7185 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || || || ||||||||||| || ||||||||||| ||| | || ||| | || ||||| Sbjct 7186 CGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTCGATCAAGGTGG 7245 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | |||||| || | || || ||||||| || || ||||| || || || | || Sbjct 7246 TAACAAGCGCCCTGGTGCTTTTGCTGTCTACCTTGAACCATGGCATGCGGATGTTTTCGA 7305 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669 |||||| || ||||| || || ||| | ||||| | || ||| || || || || Sbjct 7306 GTTTCTTGATCTGCGCAAAAACCACGGTAAGGAAGAAGTTCG-TGCACGCGATCTCTTCT 7364 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 || |||||||||| || || |||||| | || || ||| ||| |||||| Sbjct 7365 ATGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAACGGAGAGTGGACTT 7424 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 ||||||||||||| |||||||| ||| | | ||| || || |||||||| Sbjct 7425 TGATGTGCCCGAATGAGTGCCCTGGCTTGGCAGATGTTTATGGCGAGGAGTT 7476 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785 |||||| ||||| ||| || ||||| ||| | || ||| | || || | ||| Sbjct 8406 TCAAGGCCCTTTACAAGACCGTTTGGGAAATTTCTCAACGAACAATCG--TTCAAATGGC 8463 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||||||||||| ||||| || || || || ||||||| |||| || |||| Sbjct 8464 TGCTGATCGTGGTGCGTTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCC 8523 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || ||| |||| | | || ||||||||| || ||||| ||| | ||||| || Sbjct 8524 TACAATGGGCAAGATCACATCTATGCACTTTGCTGGTTGGAAATTGGGCTTGAAGACCGG 8583 Query 55906 TATGTACTATCTGCGGAC 55923 ||||||||| | || || Sbjct 8584 AATGTACTATTTACGTAC 8601 >seq1126 Length=13455 Score = 111 bits (122), Expect = 2e-19 Identities = 306/458 (67%), Gaps = 16/458 (3%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || ||||||||||| || || ||||||| ||| || |||||||| | |||| Sbjct 9667 CCAGTACCAATACCCTCTGCGCCGTTGATCAGAACCATGGGAACGACAGGGAAGTAGGTA 9726 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCG-G 117270 ||||||| | | ||| || || | || | || || | |||| ||| | Sbjct 9727 ACAGGCTCAATCGATTTACCATCATCGATATTATATTCAAGAACTGG---GTCA-TCGAG 9782 Query 117271 ATCGAA-TATGTTCTTGGTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 | || | || |||| || || | ||| | |||||||||||||| | ||| || Sbjct 9783 AGCGGAGTAGACTCTTCTCGCAAATGGCGATAGTCTTGTGAAAATGTAACGGGCGCTAGC 9842 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGA-GGTTCA 117386 || ||| | ||||| ||| | ||||||| | ||||||||||| ||||| || | Sbjct 9843 AGAATCACTACCACCCTGAAGTCTACTACCGAAATTTCCACTCGGCT-CAAGACAATTGA 9901 Query 117387 GGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCT 117446 ||| |||| || |||||||| ||||| | | ||||| || ||| | || | Sbjct 9902 CGTTATTGGAACCAACAAAGTTCTGAGCAAGGCCAACAATGGTCATTTGCATTGAAGCTT 9961 Query 117447 CACCATGGTGATACGCCG---TCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCA 117503 ||||||| ||||| || | | || | | || || || || || | | ||||||| Sbjct 9962 CACCATGATGATAGGCGGAAATTTG-ACTG--ACATAACCAGCGAGTTCCACAACCTTCA 10018 Query 117504 TGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 | || | |||||| ||||| ||| ||||| || ||||| || || | ||||| | Sbjct 10019 TATCGTTTATGAGGTTCCGCTTGAAGCAAGCATACATGACCTTCCGTTGTCCAGGCTTGA 10078 Query 117564 GACCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 ||||||| ||| ||| || |||||| | ||||| Sbjct 10079 GACCATCAATGACGGAAGGAATGGAACGCATATTGTCC 10116 >seq32 Length=157973 Score = 86.0 bits (94), Expect = 7e-12 Identities = 308/464 (66%), Gaps = 27/464 (6%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 |||||||| || | ||| || || ||||||||||| || |||| ||||| |||||||| Sbjct 142188 TAATCACCAACTCTCTTCTCGAAGAAGTTGGTCTTTCCAGCCAAGGAGATATTCTCCATG 142247 Query 74523 CAGTCGAAAGGGTTC-----TTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCATGA 74577 ||||||| ||||| |||| | ||| | | | | | |||||| | | || Sbjct 142248 AAGTCGAATGGGTTGGCAGATTTGTA--GTACTT-GTCGT-TACCCAAAGAAAGG-AGGA 142302 Query 74578 GGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTT 74637 | ||||| || || || | ||||| ||| |||| | | |||||| | ||| Sbjct 142303 GACGATCGGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCCAAGAGAG 142362 Query 74638 TGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC-CATTG--GACAA 74694 || || || |||||||| | ||||| || | |||| ||| | || ||| Sbjct 142363 CACAAGGAAGAGCCTCGGTCAAGAACTCTTGTTCAATCTCGACAGCTTCGGTGATGACG- 142421 Query 74695 TCTTGTGAATGTCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGG 74751 ||||| || | | ||||| |||| | | | || || ||| |||| | || | Sbjct 142422 TCTTG-GACGGCTTGCTTGGATGGGCGGTGCT---TGAGATGGGAGAAAAGGAGGCATGC 142477 Query 74752 CAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 ||| || | || || |||||||| | | || | ||| || || || | || || Sbjct 142478 GAAA-TC--GGTGTGAAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGACC 142534 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 | ||| || ||||||||||| | ||||||||||| | |||||| ||| ||||||||| Sbjct 142535 GGCCATGAGACCACGCTTCTTGAGCCAAAAGATGGAAGCGAAGGATCCAGAGAAGAAGAT 142594 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913 || || ||| || || ||||| || ||||| || || |||| Sbjct 142595 ACCCTCAACAGCAGCGAAAGCGACGAGACGTTGAGC-AAAGGTG 142637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547135969660000