Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botrytis_20paeoniae_20[genbank_20GCA_5F001005785.1_202015-05-11] 11,700 sequences; 44,242,179 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq477 176 5e-39 seq1972 163 3e-35 seq306 161 1e-34 seq102 149 7e-31 seq1126 107 2e-18 >seq477 Length=47751 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || ||||| || ||| | |||||||||||| Sbjct 22498 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATCACTTTGGAGGTTGAGTCATCG 22557 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || ||||| ||||||||||| || || || || || Sbjct 22558 GACACTATCGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAA 22617 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||||||||||||||| || |||| || || || | ||||| || Sbjct 22618 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 22677 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || | ||| | ||| | |||||||| ||||| Sbjct 22678 ATCCAAAAGGAATCAACCTTACATTTGGTCCTTCGTCTTCGTGGTGG 22724 Score = 163 bits (180), Expect = 3e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| ||||| || |||||||| || || ||||| ||||| |||| ||| | Sbjct 22282 GTCAAGACTCTTACTGGTAAGACTATCACCCTCGAGGTCGAGTCTTCCGATACCATCGAC 22341 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||||| || || || |||||||| || |||||||| || || |||||| | ||| Sbjct 22342 AATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCCGATCAACAGCGTTTGATT 22401 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| ||||| ||||||||||||| |||||||| | || || || | ||||||||| Sbjct 22402 TTTGCCGGTAAACAACTCGAGGATGGCCGTACCCTCTCCGATTACAACATTCAAAAGGAA 22461 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| |||| | | ||||| ||||| Sbjct 22462 TCTACCCTTCACTTAGTTCTCAGACTTCGTGGTGG 22496 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || ||||||||||| || |||| ||| | || | ||||| Sbjct 22010 ACCGGAAAGACCATCACCCTTGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGGCC 22069 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||||||||| || || ||||| |||||| | ||||| || || ||| Sbjct 22070 AAGATCCAGGATAAGGAGGGAATCCCACCTGACCAACAGCGTTTGATTTTCGCCGGAAAG 22129 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||||| || || | || || || |||||||||| |||||||| ||| Sbjct 22130 CAACTTGAGGATGGCCGCACTTTGAGTGATTACAACATCCAAAAGGAGTCCACTCTCCAT 22189 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || ||||| ||||| Sbjct 22190 CTTGTTCTCCGCCTTCGTGGTGG 22212 Score = 118 bits (130), Expect = 1e-21 Identities = 173/244 (71%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| ||||| ||||| | || || || || Sbjct 22726 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACATTAGAAGTAGAATCGTCA 22785 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | |||||||| || || || |||||||| || || || ||||| Sbjct 22786 GATACTATCGATAACGTTAAGGCTAAGATCCAAGATAAGGAGGGTATCCCACCCGACCAA 22845 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || |||||||| ||||| | ||||||| | ||||| | || ||||| Sbjct 22846 CAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGATGGCAGAACCCTTTCGGATTATAAC 22905 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 | ||||||||||| || | || | || | |||||||| ||||| ||| | || || Sbjct 22906 ATTCAAAAGGAATCGACATTGCACTTGGTGCTCCGTCTTCGTGGTGGTCAA--TAAATGT 22963 Query 27646 TTTT 27649 |||| Sbjct 22964 TTTT 22967 >seq1972 Length=10305 Score = 163 bits (180), Expect = 3e-35 Identities = 521/800 (65%), Gaps = 11/800 (1%) Strand=Plus/Minus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||| || || |||||||| || ||| ||| ||||| ||||| || ||||| Sbjct 7679 ACTCGACAATCTCTGTGCACAAGTTGGAACTGCGAATGGTACCAAGGTTCTTTTGGTTGC 7620 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || || ||||| |||| | ||| | ||||||||| || | || Sbjct 7619 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGGTTTCCGGTCTCGGTTTGAGCCT 7560 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 || || | || ||||| || | ||||||| |||||| |||||| | | Sbjct 7559 CAAGAATAGAGTACCAAAGCTTTTGTGCCTTGATAGTCTTGCGACCCTTGCCTGCCTTCT 7500 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 |||| | |||| | ||||||| | || | || || | | | | ||||||| Sbjct 7499 CATAACTTTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAGCCAGGGCACT 7440 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 | || |||||||||| ||| || || || || ||| ||||||||| |||| Sbjct 7439 CATTCGGGCACATCAAAGTCCACTCTCCGTTCTTTTCAACACGCTTCATGAATAGATCAG 7380 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 | ||||| | ||| ||| || ||||| ||| || | || || | ||| ||||| | Sbjct 7379 GAATCCACAAGGCATAGAAGAGATCGCGTGCA-CGAACTTCTTCCTTACCGTGGTTTTTG 7321 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 |||| || ||||| || | | |||||||||||||| || || || || || | | Sbjct 7320 CGCAGATCAAGAAACTCGAAAACATCCGCATGCCATGGTTCAAGGTAGACAGCAAAAGCA 7261 Query 81367 CCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||| | ||||| || | ||| || | |||||| ||| || || || | | Sbjct 7260 CCAGGGCGCTTGTTACCACCTTGATCGACATATCTGGCAGTGTTGTTGAAAACTCGGAGC 7201 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 ||||| | ||||| | || | ||||| ||||| |||| | || | || || Sbjct 7200 ATAGGAACAATACCGTTGGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTAGCACGA 7141 Query 81484 ACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTT 81542 | || ||| || |||||| || ||||| | ||| || ||| ||||| || Sbjct 7140 ATTCTG-TGAATGTTAAGACCAATACCACCAGCATTCTTCGAGATCATGGCACAAATCTT 7082 Query 81543 CATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGA 81602 || || || || || || || || || || | ||||| || | | ||| || ||| Sbjct 7081 CAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATATCGATGAGGAAGCATGATGA 7022 Query 81603 CATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660 | | | |||| | ||| || || || |||||||||| ||||| | || || Sbjct 7021 AAGTT--GTGCTTGTGGAGTACCTGCCGAAAAGAGTGTTGGGGAAGCGTGTGTAAAGTAC 6964 Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720 ||| ||||||| || ||| ||||| | | | | || || |||||||||||||| Sbjct 6963 TTGTTGGACATCAAGTTATAAGTTTCGATAGCACTTTCGATGTCATCACCGTGAATACCA 6904 Query 81721 ATAGCTACACGCATAAACAT 81740 | || |||||||| | ||| Sbjct 6903 ACGGCAACACGCATGATCAT 6884 >seq306 Length=72094 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || ||||| || || || || ||||||||||| Sbjct 24811 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 24752 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || || |||||||||||||| || || ||||| Sbjct 24751 GACACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCCGACCAA 24692 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || ||||||||||| |||| || ||||| | ||||| || Sbjct 24691 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCCTCTCCGACTACAAC 24632 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||||||||| | || || ||||| || ||||| Sbjct 24631 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 24585 >seq102 Length=67028 Score = 149 bits (164), Expect = 7e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| ||||| |||||||| || ||||||||||| ||||| ||| | ||| Sbjct 14624 CTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGACACCAT 14565 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||||| || || || ||||||||||||||||| || || || || ||| | Sbjct 14564 CGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTT 14505 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| |||||||| ||||| | ||||| || ||||||| || ||||||| Sbjct 14504 GATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAA 14445 Query 27594 GG 27595 || Sbjct 14444 GG 14443 >seq1126 Length=13455 Score = 107 bits (118), Expect = 2e-18 Identities = 200/291 (69%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 31962 GCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGC 32021 ||| |||||||| ||| || || ||||||||| ||| || ||||| || || || Sbjct 10107 GCGTTCCATTCCTTCCGTCATTGATGGTCTCAAGCCTGGACAACGGAAGGTCATGTATGC 10048 Query 32022 CTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGC 32081 ||| ||||| |||||| | || |||||||| | | | || | || || || | Sbjct 10047 TTGCTTCAAGCGGAACCTCATAAACGATATGAAGGTTGTGGAACTCGCTGGTTATGT--C 9990 Query 32082 AGAGCAAA---CGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138 || |||| | |||||||| || || || || || | || |||||||| ||| Sbjct 9989 AGT-CAAATTTCCGCCTATCATCATGGTGAAGCTTCAATGCAAATGACCATTGTTGGCCT 9931 Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198 ||||||||||||||| ||| | |||||| | || | || ||||| |||| | || || Sbjct 9930 TGCTCAGAACTTTGTTGGTTCCAATAACGTCAATTGTCTTGAGCCGAGTGGAAATTTCGG 9871 Query 32199 GACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249 | | || ||||| | ||| |||| ||| |||||||||| ||||| Sbjct 9870 TAGTAGACTTCAGGGTGGTAGTGATTCTGCTAGCGCCCGTTACATTTTCAC 9820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570226992104000